RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TTC1Q99614 292 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 UBP1Q9NZI7 540 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 TIMM13Q9Y5L4 95 aaPredicted RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 PLXNB2O15031 1838 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 PDHXO00330 501 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 LUC7L3O95232 432 aaKnown RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 CYP2C9P11712 490 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 TYK2P29597 1187 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 MAP3K7CLP57077 242 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 IRF9Q00978 393 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 ITGA9Q13797 1035 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 DPY19L2Q6NUT2 758 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 PAQR9Q6ZVX9 377 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 B3GALNT2Q8NCR0 500 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 GSTCDQ8NEC7 633 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 PIWIL2Q8TC59 973 aaKnown RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SORT1Q99523 831 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 GORASP1Q9BQQ3 440 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 MAN1C1Q9NR34 630 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 MORF4L1Q9UBU8 362 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SHROOM3Q8TF72 1996 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 A6NHS1 94 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 BIRC5O15392 142 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SBF1O95248 1867 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 ACADSP16219 412 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 USP4Q13107 963 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 TIFABQ6ZNK6 161 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 STRADAQ7RTN6 431 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 BAG2O95816 211 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SERPINA6P08185 405 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
XRCC3-218ENST00000557439 PGAM1P18669 254 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 FDFT1P37268 417 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 CCNHP51946 323 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SNX16P57768 344 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 PPP2R5DQ14738 602 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 DGKDQ16760 1214 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 WSCD1Q658N2 575 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 FAM91A1Q658Y4 838 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 TMEM154Q6P9G4 183 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 SLC7A14Q8TBB6 771 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 ZNF669Q96BR6 464 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-218ENST00000557439 PPP1R36Q96LQ0 422 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 TMEM30AQ9NV96 361 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-218ENST00000557439 STX18Q9P2W9 335 aaKnown RBP18.18■□□□□ 0.5
XRCC3-218ENST00000557439 PPM1HQ9ULR3 514 aa18.18■□□□□ 0.5
XRCC3-218ENST00000557439 LOC100653049A0A140TA62 436 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 ZNF487B1APH4 448 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 ATP9BO43861 1147 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 KRT34O76011 436 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 PDE5AO76074 875 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 TPH1P17752 444 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 AFF1P51825 1210 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 SNAPC2Q13487 334 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DUSP28Q4G0W2 176 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 KYAT3Q6YP21 454 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 LMNTD2Q8IXW0 634 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 CDKL2Q92772 493 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 FAM136AQ96C01 138 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 KCNK16Q96T55 309 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 GTF2IRD1Q9UHL9 959 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 CORO1CQ9ULV4 474 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DERAQ9Y315 318 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DICER1Q9UPY3 1922 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 EEF2KO00418 725 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 GLRA3O75311 464 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 TM7SF2O76062 418 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 PROCP04070 461 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 GCKP35557 465 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 TAF6P49848 677 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 RAP1GDS1P52306 607 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 EPHB1P54762 984 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 LILRA4P59901 499 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DEUP1Q05D60 604 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 IFRD2Q12894 506 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 EFHC1Q5JVL4 640 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 CERCAMQ5T4B2 595 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 C1orf146Q5VVC0 180 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 C4orf22Q6V702 233 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 WDR75Q8IWA0 830 aaKnown RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DCLK2Q8N568 766 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 NPWQ8N729 165 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 NPLOC4Q8TAT6 608 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 EMID1Q96A84 441 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 MFSD3Q96ES6 412 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 CERS2Q96G23 380 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 MED10Q9BTT4 135 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 MMADHCQ9H3L0 296 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-218ENST00000557439 DLGAP2Q9P1A6 1054 aa18.17■□□□□ 0.5
XRCC3-218ENST00000557439 PACSIN3Q9UKS6 424 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms