RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-213ENST00000557262 A0A1B0GVT2 93 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 THAP12O43422 761 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 CSKP41240 450 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 AFF3P51826 1226 aaKnown RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 CDH18Q13634 790 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 TTC31Q49AM3 519 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 DCAF6Q58WW2 860 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 FSCBQ5H9T9 825 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 DBX2Q6ZNG2 339 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 KDM1BQ8NB78 822 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 BIRC7Q96CA5 298 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 RSPH9Q9H1X1 276 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 MTG2Q9H4K7 406 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 POPDC2Q9HBU9 364 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-213ENST00000557262 CYTH4Q9UIA0 394 aa16.46■□□□□ 0.23
TUBB3-213ENST00000557262 CHD6Q8TD26 2715 aa16.46■□□□□ 0.22
TUBB3-213ENST00000557262 ZZEF1O43149 2961 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 AKAP13Q12802 2813 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 E5RJQ4 531 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 RNASEH1O60930 286 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 CBFA2T3O75081 653 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 LUC7L3O95232 432 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 MOCS3O95396 460 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 MOCS2O96007 188 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 APOEP02649 317 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 GNA15P30679 374 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 ARID5BQ14865 1188 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 TEAD4Q15561 434 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 HNRNPA1L2Q32P51 320 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 ZC3H12AQ5D1E8 599 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 USP30Q70CQ3 517 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 GLRX5Q86SX6 157 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 TAC4Q86UU9 113 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 CREBRFQ8IUR6 639 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 SETD7Q8WTS6 366 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 ADAMTS14Q8WXS8 1223 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 MRGPRX3Q96LB0 322 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■■□□ 18.7
TUBB3-213ENST00000557262 KIAA1468Q9P260 1216 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 SLC12A6Q9UHW9 1150 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 XPO7Q9UIA9 1087 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 PCOLCE2Q9UKZ9 415 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 ERVW-1Q9UQF0 538 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 APOBEC2Q9Y235 224 aaKnown RBP16.45■□□□□ 0.22
TUBB3-213ENST00000557262 PCDHGB2Q9Y5G2 931 aa16.45■□□□□ 0.22
TUBB3-213ENST00000557262 IGF2RP11717 2491 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SIN3BO75182 1162 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 FSBPO95073 299 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 FTH1P19P0C7X4 201 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SLC9A1P19634 815 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 TACR2P21452 398 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 CD27P26842 260 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 EIF4EBP2Q13542 120 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SUZ12Q15022 739 aaKnown RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 PITRM1Q5JRX3 1037 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 MMS22LQ6ZRQ5 1243 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 ATP6V0D2Q8N8Y2 350 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 GANCQ8TET4 914 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 PABPC3Q9H361 631 aaKnown RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 TM9SF3Q9HD45 589 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 FBXL12Q9NXK8 326 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 TJP2Q9UDY2 1190 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 ANKRD6Q9Y2G4 727 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 FNDC3AQ9Y2H6 1198 aaKnown RBP16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SLCO1B1Q9Y6L6 691 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 SPEGQ15772 3267 aa16.44■□□□□ 0.22
TUBB3-213ENST00000557262 WDFY3Q8IZQ1 3526 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 IGLV3-25P01717 112 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 USP8P40818 1118 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 GRIA4P48058 902 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 ECT2LQ008S8 904 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 KIF19Q2TAC6 998 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 C9orf64Q5T6V5 341 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 RAP1GAP2Q684P5 730 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 KIAA0895LQ68EN5 471 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 CHSY1Q86X52 802 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
TUBB3-213ENST00000557262 WDTC1Q8N5D0 677 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 PNPLA1Q8N8W4 532 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms