RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CLSTN1O94985 981 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 HLA-DRAP01903 254 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 ADORA2BP29275 332 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 CASP1P29466 404 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 GTF2H1P32780 548 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 ME1P48163 572 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 VAMP7P51809 220 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 MFAP3P55082 362 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 ZNF445P59923 1031 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 FAM193AP78312 1265 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 DLG4P78352 724 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 HIF1AQ16665 826 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 FUT11Q495W5 492 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 C1orf220Q5T0J3 134 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 FYB2Q5VWT5 728 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 DBX2Q6ZNG2 339 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 INTS8Q75QN2 995 aaKnown RBP9.08□□□□□ -0.96
VRK1-206ENST00000557222 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 SCD5Q86SK9 330 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 PROSER1Q86XN7 944 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 NAXDQ8IW45 347 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 DEFB119Q8N690 84 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 CCDC150Q8NCX0 1101 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 SNX21Q969T3 373 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 TOE1Q96GM8 510 aaKnown RBP9.08□□□□□ -0.96
VRK1-206ENST00000557222 PAGE5Q96GU1 130 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 PIWIL1Q96J94 861 aaKnown RBP9.08□□□□□ -0.96
VRK1-206ENST00000557222 NUP58Q9BVL2 599 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 FBRSQ9HAH7 460 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 ELOVL2Q9NXB9 296 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 CACNA2D2Q9NY47 1150 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 HMGXB4Q9UGU5 601 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 RCOR1Q9UKL0 485 aa9.08□□□□□ -0.96
VRK1-206ENST00000557222 ADAMTS9Q9P2N4 1935 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 WASH3PC4AMC7 463 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 SYNCRIPO60506 623 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 CBFA2T3O75081 653 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 CER1O95813 267 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 KLKB1P03952 638 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 CYBBP04839 570 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 NCAM1P13591 858 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 ALAS2P22557 587 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 RPL13P26373 211 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 PIK3CAP42336 1068 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 RING1Q06587 406 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 GRIK2Q13002 908 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 KIAA1324Q6UXG2 1013 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 CCNI2Q6ZMN8 369 aaPredicted RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 ANKS1BQ7Z6G8 1248 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 TMPRSS6Q8IU80 811 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 FAM217AQ8IXS0 508 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 RBBP8NLQ8NC74 664 aaPredicted RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 PRCCQ92733 491 aaPredicted RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 CCDC47Q96A33 483 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 SIPA1Q96FS4 1042 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 TWNKQ96RR1 684 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 CDC6Q99741 560 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 MKRN2Q9H000 416 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 TMEM8AQ9HCN3 771 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 FSCN3Q9NQT6 498 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 PCOLCE2Q9UKZ9 415 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 STRIP2Q9ULQ0 834 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 RAD54BQ9Y620 910 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 URB1O60287 2271 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 SMG1Q96Q15 3661 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 GOLGA4Q13439 2230 aaKnown RBP9.07□□□□□ -0.96
VRK1-206ENST00000557222 ASXL3Q9C0F0 2248 aa9.07□□□□□ -0.96
VRK1-206ENST00000557222 MEI4A8MW99 385 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 TAF4O00268 1085 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 MSTNO14793 375 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 BCAT2O15382 392 aaPredicted RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 LATS1O95835 1130 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 F13A1P00488 732 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 FTH1P19P0C7X4 201 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 ACADMP11310 421 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 KRT13P13646 458 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 CMA1P23946 247 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 CORO1AP31146 461 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 PSMC2P35998 433 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 MATKP42679 507 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 IL12RB1P42701 662 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 TPMTP51580 245 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 SLC8A3P57103 927 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 ZBTB16Q05516 673 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 ORC1Q13415 861 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
VRK1-206ENST00000557222 ACAP1Q15027 740 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 GEN1Q17RS7 908 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 RAB41Q5JT25 222 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 ARHGAP17Q68EM7 881 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 PM20D1Q6GTS8 502 aa9.06□□□□□ -0.96
VRK1-206ENST00000557222 SPOPLQ6IQ16 392 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms