RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SPATA31A1Q5TZJ5 1347 aa5.13□□□□□ -1.59
ATXN3-246ENST00000557030 FRMPD2Q68DX3 1309 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-246ENST00000557030 ITIH6Q6UXX5 1313 aa5.13□□□□□ -1.59
ATXN3-246ENST00000557030 UBN2Q6ZU65 1347 aa5.13□□□□□ -1.59
ATXN3-246ENST00000557030 DOT1LQ8TEK3 1739 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 NUP98P52948 1817 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CTAGE15A4D2H0 777 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 LRRC3CA6NJW4 275 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TMEM232C9JQI7 657 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 MASP2O00187 686 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 GPAA1O43292 621 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TRIAP1O43715 76 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CTAGE8P0CG41 777 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 IFNAR1P17181 557 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CAPN2P17655 700 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 XBP1P17861 261 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 FGFR2P21802 821 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CD38P28907 300 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CD6P30203 668 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 IL6STP40189 918 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 LMAN1P49257 510 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ZNF134P52741 427 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 EIF5P55010 431 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 NXPH1P58417 271 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 HAND2P61296 217 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ITPK1Q13572 414 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 PPP2R5BQ15173 497 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 LONRF3Q496Y0 759 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 HSP90AB3PQ58FF7 597 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 RBM20Q5T481 1227 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 SPATA1Q5VX52 437 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 SUSD4Q5VX71 490 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 KAZNQ674X7 775 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 SWSAP1Q6NVH7 229 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 APOA5Q6Q788 366 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TMEM108Q6UXF1 575 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TOGARAM2Q6ZUX3 1019 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 RASGRP2Q7LDG7 609 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CHST15Q7LFX5 561 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CHST3Q7LGC8 479 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 SRLQ86TD4 932 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CTAGE6Q86UF2 777 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CTAGE4Q8IX94 777 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TMTC2Q8N394 836 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CCDC148Q8NFR7 591 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 RUBCNQ92622 972 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 NELL1Q92832 810 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 DHX58Q96C10 678 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 UROC1Q96N76 676 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 NAPGQ99747 312 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ACTRT3Q9BYD9 372 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 KRT23Q9C075 422 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 AMBRA1Q9C0C7 1298 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 VIPAS39Q9H9C1 493 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ATP6V0A4Q9HBG4 840 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 PIH1D3Q9NQM4 214 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 TRMT112Q9UI30 125 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 FBXO2Q9UK22 296 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 RRP15Q9Y3B9 282 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 PLEKHM1Q9Y4G2 1056 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 SRPRBQ9Y5M8 271 aaKnown RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 AKAP11Q9UKA4 1901 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ADGRA2Q96PE1 1338 aa5.12□□□□□ -1.59
ATXN3-246ENST00000557030 CICQ96RK0 1608 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-246ENST00000557030 ANKRD18BA2A2Z9 1011 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CFAP69A5D8W1 941 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CAPN8A6NHC0 703 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 FAM227AF5H4B4 570 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 H3BQF6 201 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MYO1CO00159 1063 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 RBMXL2O75526 392 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SOAT2O75908 522 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CAMTA2O94983 1202 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 DEXIO95424 95 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MMP1P03956 469 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MYL1P05976 194 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 RHOP08100 348 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 UQCRFS1P1P0C7P4 283 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ADD2P35612 726 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MAGEA9P43362 315 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 AGFG1P52594 562 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 UCP3P55916 312 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 LILRA4P59901 499 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 GPSM2P81274 684 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ITIH3Q06033 890 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CKAP4Q07065 602 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 EIF2B5Q13144 721 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 KARSQ15046 597 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CNN3Q15417 329 aaKnown RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ZNF569Q5MCW4 686 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 BEND6Q5SZJ8 279 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-246ENST00000557030 ISM2Q6H9L7 571 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CCDC70Q6NSX1 233 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 WDR93Q6P2C0 686 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 LAYNQ6UX15 382 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 CYP26C1Q6V0L0 522 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 LDHAL6AQ6ZMR3 332 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 MAEAQ7L5Y9 396 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 SPATA20Q8TB22 786 aa5.11□□□□□ -1.59
ATXN3-246ENST00000557030 PPM1EQ8WY54 764 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms