RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ADIPOR2Q86V24 386 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 TSTD1Q8NFU3 115 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 NKD2Q969F2 451 aaPredicted RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 RPRD1AQ96P16 312 aaPredicted RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ACOX2Q99424 681 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 GABRG3Q99928 467 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 TRIM5Q9C035 493 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 CIPCQ9C0C6 399 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 SIK2Q9H0K1 926 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 MRPL47Q9HD33 250 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ZDHHC4Q9NPG8 344 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ZNHIT6Q9NWK9 470 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 VANGL2Q9ULK5 521 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 PLA2G4CQ9UP65 541 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 STON1Q9Y6Q2 735 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 EML5Q05BV3 1969 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 DRGXA6NNA5 263 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 I6L893 689 aaPredicted RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 HRO43593 1189 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 MOCS3O95396 460 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ATP5BP06576 529 aaKnown RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 POLR2EP19388 210 aaKnown RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 CD70P32970 193 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ADRA1BP35368 520 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 RPL7AP62424 266 aaKnown RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 LMAN2Q12907 356 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 MAMLD1Q13495 774 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ENPP2Q13822 863 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 FSCBQ5H9T9 825 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 SH3PXD2AQ5TCZ1 1133 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 MBLAC2Q68D91 279 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 CHST9Q7L1S5 443 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 RASSF3Q86WH2 238 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 IGSF8Q969P0 613 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 TTC17Q96AE7 1141 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 LMLNQ96KR4 655 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 HHIPQ96QV1 700 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 DNAJC7Q99615 494 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 CNPY3Q9BT09 278 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ANLNQ9NQW6 1124 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 ARHGAP20Q9P2F6 1191 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 CNOT8Q9UFF9 292 aaKnown RBP11.03□□□□□ -0.64
LINC00239-201ENST00000556973 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
LINC00239-201ENST00000556973 USP34Q70CQ2 3546 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 A0A087X0T9 212 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 A0A1B0GVM2 712 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 A0A1W2PQF6 199 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 TCAF2A6NFQ2 919 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 WASH3PC4AMC7 463 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 AXIN1O15169 862 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 AP5Z1O43299 807 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 CLDN11O75508 207 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 PLEKP08567 350 aaPredicted RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 DLDP09622 509 aaKnown RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 FAM228BP0C875 321 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 HOXB2P14652 356 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 HOXC13P31276 330 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 IL12RB1P42701 662 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 WASP42768 502 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 PLK1P53350 603 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 AIF1P55008 147 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 CDH4P55283 916 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 HDAC4P56524 1084 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF177Q13360 481 aaPredicted RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF234Q14588 700 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 C14orf80Q86SX3 495 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 FAM131BQ86XD5 332 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 DNAAF5Q86Y56 855 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF683Q8IZ20 524 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 OSBPL2Q9H1P3 480 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 RETREG1Q9H6L5 497 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 ABHD10Q9NUJ1 306 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.65
LINC00239-201ENST00000556973 MYO18AQ92614 2054 aaKnown RBP11.02□□□□□ -0.65
LINC00239-201ENST00000556973 DOCK4Q8N1I0 1966 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 IGLV3-10A0A075B6K4 115 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 AKR1B15C9JRZ8 316 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 E9PAM4 449 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 CCP110O43303 1012 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SRGAP2O75044 1071 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 MFAP3LO75121 409 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 RNF8O76064 485 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ASLP04424 464 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms