RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CSNK1EP49674 416 aaKnown RBP13.29□□□□□ -0.28
PSEN1-219ENST00000556951 TPMTP51580 245 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 DLG4P78352 724 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 CLDN10P78369 228 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 SEMG2Q02383 582 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 PPP3CAQ08209 521 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 SURF1Q15526 300 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 DUOXA2Q1HG44 320 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 TPGS1Q6ZTW0 290 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 OR6B3Q8NGW1 331 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 TTC9Q92623 222 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 NUCKS1Q9H1E3 243 aaKnown RBP13.29□□□□□ -0.28
PSEN1-219ENST00000556951 WDR35Q9P2L0 1181 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 DAAM1Q9Y4D1 1078 aa13.29□□□□□ -0.28
PSEN1-219ENST00000556951 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KCNK3O14649 394 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 TNFSF14O43557 240 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 TNNC2P02585 160 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KRT10P13645 584 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 SLC9A1P19634 815 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 FECHP22830 423 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 GCLMP48507 274 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 DGKGP49619 791 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 COPAP53621 1224 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KIF19Q2TAC6 998 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 CBWD6Q4V339 395 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 CBWD3Q5JTY5 395 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 CBWD5Q5RIA9 395 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 TMTC1Q8IUR5 882 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 TMEM8AQ9HCN3 771 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 ZNHIT6Q9NWK9 470 aaKnown RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 THAP10Q9P2Z0 257 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-219ENST00000556951 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 SNX11Q9Y5W9 270 aa13.28□□□□□ -0.28
PSEN1-219ENST00000556951 A8MXQ7 604 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 EPHB6O15197 1021 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 BEST1O76090 585 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 MXI1P50539 228 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 AP3M2P53677 418 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 SLC5A3P53794 718 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 KRT39Q6A163 491 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 DHRS13Q6UX07 377 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 Q6ZNB5 142 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 TMEM139Q8IV31 216 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 WDR49Q8IV35 697 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 SYN2Q92777 582 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-219ENST00000556951 SMOQ99835 787 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 GANQ9H2C0 597 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 COMMD8Q9NX08 183 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 PLK2Q9NYY3 685 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 MYO6Q9UM54 1294 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-219ENST00000556951 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-219ENST00000556951 POLQO75417 2590 aa13.27□□□□□ -0.29
PSEN1-219ENST00000556951 TLR5O60602 858 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 DLATP10515 647 aaKnown RBP13.26□□□□□ -0.29
PSEN1-219ENST00000556951 C7P10643 843 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 OXTRP30559 389 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
PSEN1-219ENST00000556951 CDH8P55286 799 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 CLDN6P56747 220 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
PSEN1-219ENST00000556951 CDK17Q00537 523 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 NUMA1Q14980 2115 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 MEA1Q16626 185 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 SPACA3Q8IXA5 215 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 LMO3Q8TAP4 145 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 SIPA1Q96FS4 1042 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 FAM117AQ9C073 453 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 COQ4Q9Y3A0 265 aa13.26□□□□□ -0.29
PSEN1-219ENST00000556951 R3HCC1Q9Y3T6 440 aaKnown RBP13.26□□□□□ -0.29
PSEN1-219ENST00000556951 H0Y8X5 98 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms