RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 LMAN2Q12907 356 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 CCDC14Q49A88 953 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 ACBD5Q5T8D3 534 aaPredicted RBP23.62■■□□□ 1.37
TDP1-216ENST00000556867 HGSNATQ68CP4 663 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 DNAJC24Q6P3W2 148 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 CARNMT1Q8N4J0 409 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 LUC7L2Q9Y383 392 aaKnown RBP23.62■■□□□ 1.37
TDP1-216ENST00000556867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.62■■□□□ 1.37
TDP1-216ENST00000556867 BZW2Q9Y6E2 419 aaKnown RBP23.62■■□□□ 1.37
TDP1-216ENST00000556867 STON1Q9Y6Q2 735 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 GVINP1Q7Z2Y8 2422 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 A0A1B0GVM2 712 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 TCRBV21S2A2A0A5A6 115 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 TCAF2A6NFQ2 919 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 RPP40O75818 363 aaKnown RBP23.61■■□□□ 1.37
TDP1-216ENST00000556867 GZMAP12544 262 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 SKILP12757 684 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 ATP11AP98196 1134 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 SIM2Q14190 667 aaPredicted RBP23.61■■□□□ 1.37
TDP1-216ENST00000556867 ZNF234Q14588 700 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 FUT11Q495W5 492 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 C5orf22Q49AR2 442 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 MBLAC2Q68D91 279 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 STRADAQ7RTN6 431 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 CPLX3Q8WVH0 158 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 SORCS1Q8WY21 1168 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 RPRD1AQ96P16 312 aaPredicted RBP23.61■■□□□ 1.37
TDP1-216ENST00000556867 VANGL2Q9ULK5 521 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 PLXND1Q9Y4D7 1925 aa23.61■■□□□ 1.37
TDP1-216ENST00000556867 WASH3PC4AMC7 463 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 H0Y626 953 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 GPD1P21695 349 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 RRM1P23921 792 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 GGCXP38435 758 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 IL12RB1P42701 662 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 C15orf59Q2T9L4 293 aaPredicted RBP23.6■■□□□ 1.37
TDP1-216ENST00000556867 TDRD12Q587J7 1177 aaKnown RBP23.6■■□□□ 1.37
TDP1-216ENST00000556867 FSCBQ5H9T9 825 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 PPP1R15BQ5SWA1 713 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 WDR59Q6PJI9 974 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 CIR1Q86X95 450 aaPredicted RBP23.6■■□□□ 1.37
TDP1-216ENST00000556867 FAM131BQ86XD5 332 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 CCAR2Q8N163 923 aaKnown RBP23.6■■□□□ 1.37
TDP1-216ENST00000556867 CENPIQ92674 756 aaPredicted RBP23.6■■□□□ 1.37
TDP1-216ENST00000556867 IGSF8Q969P0 613 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 C1orf74Q96LT6 269 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 HAPLN3Q96S86 360 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 TPSD1Q9BZJ3 242 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 SIK2Q9H0K1 926 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 RAB23Q9ULC3 237 aa23.6■■□□□ 1.37
TDP1-216ENST00000556867 WDR87Q6ZQQ6 2873 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 TMCO5BA8MYB1 307 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 SERPING1P05155 500 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 DLDP09622 509 aaKnown RBP23.59■■□□□ 1.37
TDP1-216ENST00000556867 POLR2EP19388 210 aaKnown RBP23.59■■□□□ 1.37
TDP1-216ENST00000556867 TRIM14Q14142 442 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 CDO1Q16878 200 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 SPECC1LQ69YQ0 1117 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 KIAA1211LQ6NV74 962 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 PRR23BQ6ZRT6 265 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 CEP68Q76N32 757 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 C14orf80Q86SX3 495 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 ZNF683Q8IZ20 524 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 HMGB4Q8WW32 186 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 TTC17Q96AE7 1141 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 MCEEQ96PE7 176 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 TMPRSS4Q9NRS4 437 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 KIAA1522Q9P206 1035 aaPredicted RBP23.59■■□□□ 1.37
TDP1-216ENST00000556867 BCCIPQ9P287 314 aaKnown RBP eCLIP23.59■■□□□ 1.37
TDP1-216ENST00000556867 INTS6Q9UL03 887 aaKnown RBP23.59■■□□□ 1.37
TDP1-216ENST00000556867 RAD54BQ9Y620 910 aa23.59■■□□□ 1.37
TDP1-216ENST00000556867 DOCK4Q8N1I0 1966 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 ANKRD62A6NC57 917 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 RTN2O75298 545 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 ATP5BP06576 529 aaKnown RBP23.58■■□□□ 1.37
TDP1-216ENST00000556867 GABRG2P18507 467 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 CASP14P31944 242 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 IRAK1P51617 712 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 STARD3Q14849 445 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 PTPRNQ16849 979 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 USP39Q53GS9 565 aaKnown RBP23.58■■□□□ 1.37
TDP1-216ENST00000556867 RAB6CQ53S08 254 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 SH3PXD2AQ5TCZ1 1133 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 SERPINA13PQ6UXR4 307 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 CYB5D2Q8WUJ1 264 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 RAB6CQ9H0N0 254 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 PLA2G4CQ9UP65 541 aa23.58■■□□□ 1.37
TDP1-216ENST00000556867 FRYLO94915 3013 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 FTLP02792 175 aaPredicted RBP23.57■■□□□ 1.36
TDP1-216ENST00000556867 ASLP04424 464 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 PRKCHP24723 683 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 CSKP41240 450 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 ZNF143P52747 638 aaPredicted RBP23.57■■□□□ 1.36
TDP1-216ENST00000556867 OXCT1P55809 520 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 HDAC4P56524 1084 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 RPL7AP62424 266 aaKnown RBP23.57■■□□□ 1.36
TDP1-216ENST00000556867 SLC12A1Q13621 1099 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 PITRM1Q5JRX3 1037 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 LAIR1Q6GTX8 287 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 PLEKHA7Q6IQ23 1121 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms