RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FBXO43Q4G163 708 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 PREPLQ4J6C6 727 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 ALFQ53S48 1182 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 C2orf27AQ580R0 203 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FSCBQ5H9T9 825 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 EFHC2Q5JST6 749 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 ARTNQ5T4W7 220 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FAM72AQ5TYM5 149 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 EMC10Q5UCC4 262 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 TTC39BQ5VTQ0 682 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FAM72DQ6L9T8 149 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 ANKS1BQ7Z6G8 1248 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FAM72BQ86X60 149 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 DTWD2Q8NBA8 298 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 ACRBPQ8NEB7 543 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 RPLP0P6Q8NHW5 317 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 SLC35G2Q8TBE7 412 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 SPATA6Q9NWH7 488 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 C2orf42Q9NWW7 574 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 MPP6Q9NZW5 540 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 OR12D3Q9UGF7 316 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 GGA2Q9UJY4 613 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 INTUQ9ULD6 942 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FZD10Q9ULW2 581 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 SLC27A6Q9Y2P4 619 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 REXO2Q9Y3B8 237 aaKnown RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 NYNRINQ9P2P1 1898 aaKnown RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 CHD5Q8TDI0 1954 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 A0A0A0MRY4 1105 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 A0A1B0GVM2 712 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 TCAF2A6NFQ2 919 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 TMEM110-MUSTN1A8MSY1 372 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 H0Y626 953 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 MYO1FO00160 1098 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 CHRM1P11229 460 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 PABPC1P11940 636 aaKnown RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 TIE1P35590 1138 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 MAGEA9P43362 315 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 NUMBP49757 651 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 LMAN2Q12907 356 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 PIGHQ14442 188 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 C5orf22Q49AR2 442 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 LRRC31Q6UY01 552 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 CYP4V2Q6ZWL3 525 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 CCDC117Q8IWD4 279 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 SYNPOQ8N3V7 929 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 NIPA2Q8N8Q9 360 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 FIBINQ8TAL6 211 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 DESI2Q9BSY9 194 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 SNRNP25Q9BV90 132 aaKnown RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 OSBPL2Q9H1P3 480 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 POLR3BQ9NW08 1133 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-225ENST00000556798 HCN2Q9UL51 889 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 AP4E1Q9UPM8 1137 aa18.03■□□□□ 0.48
SHMT2-225ENST00000556798 IGLV3-10A0A075B6K4 115 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 PRPSAP2O60256 369 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 LRIG2O94898 1065 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 IPO7O95373 1038 aaKnown RBP18.02■□□□□ 0.48
SHMT2-225ENST00000556798 IL1R2P27930 398 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 TNFRSF4P43489 277 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 CA9Q16790 459 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 SMTNL2Q2TAL5 461 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 EGFLAMQ63HQ2 1017 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 TMEM215Q68D42 235 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 NUDT18Q6ZVK8 323 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 CHST9Q7L1S5 443 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 TFAP2DQ7Z6R9 452 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 CCDC33Q8N5R6 958 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 ALLCQ8N6M5 410 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHMT2-225ENST00000556798 USP33Q8TEY7 942 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 SORCS1Q8WY21 1168 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 LMLNQ96KR4 655 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 ZWILCHQ9H900 591 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 USP18Q9UMW8 372 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 NEU3Q9UQ49 428 aa18.02■□□□□ 0.48
SHMT2-225ENST00000556798 WDFY4Q6ZS81 3184 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 RCCD1A6NED2 376 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 DRGXA6NNA5 263 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 PCK1P35558 622 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 CSKP41240 450 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 KIR2DL1P43626 348 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 AIF1P55008 147 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 CDH4P55283 916 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 NRG1Q02297 640 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 MESDQ14696 234 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 ACAP1Q15027 740 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 FUT11Q495W5 492 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 ACBD5Q5T8D3 534 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 MANEALQ5VSG8 457 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 TXNRD3NBQ6F5E7 133 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 CXorf57Q6NSI4 855 aaKnown RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 RWDD4Q6NW29 188 aaKnown RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 ADIPOR2Q86V24 386 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms