RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FIBINQ8TAL6 211 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 NT5C3BQ969T7 300 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 MRGPRX3Q96LB0 322 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 NPY6RQ99463 290 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 DDX50Q9BQ39 737 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 RTKNQ9BST9 563 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ANLNQ9NQW6 1124 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 STIM2Q9P246 746 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 DAAM1Q9Y4D1 1078 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SYNJ2BP-COX16A0A087WUM0 186 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 TIMM44O43615 452 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 IGLV3-19P01714 112 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 CYP1A1P04798 512 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 EPHX1P07099 455 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 SDHBP21912 280 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 CCR1P32246 355 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 NOS2P35228 1153 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 SOX5P35711 763 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 FLT3P36888 993 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 GGCXP38435 758 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 MATKP42679 507 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 RPL6Q02878 288 aaKnown RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 CDH18Q13634 790 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 FNDC3BQ53EP0 1204 aaKnown RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ARTNQ5T4W7 220 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 NAA35Q5VZE5 725 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 LYSMD4Q5XG99 296 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 CXorf57Q6NSI4 855 aaKnown RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 SLC36A4Q6YBV0 504 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF677Q86XU0 584 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ATP6V0D2Q8N8Y2 350 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF557Q8N988 423 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 TTC17Q96AE7 1141 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 PGAP3Q96FM1 320 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ERGIC2Q96RQ1 377 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 EDEM2Q9BV94 578 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 SYNCQ9H7C4 482 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 PRDM16Q9HAZ2 1276 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 NLRC4Q9NPP4 1024 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 TMEM74BQ9NUR3 256 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 COX16Q9P0S2 106 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 EVLQ9UI08 416 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-224ENST00000556737 PILRBQ9UKJ0 227 aa10.68□□□□□ -0.7
SHMT2-224ENST00000556737 ITIH6Q6UXX5 1313 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TYW5A2RUC4 315 aaKnown RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 DCDC2BA2VCK2 349 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 F5H5T6 163 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 M0QYT0 321 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TM4SF5O14894 197 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 MAP3K13O43283 966 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 AP5Z1O43299 807 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 SERPINC1P01008 464 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TPM2P07951 284 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 SLC2A3P11169 496 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 ITPKAP23677 461 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CSKP41240 450 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 SULT1E1P49888 294 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 SNX16P57768 344 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 FOXK2Q01167 660 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CDR2Q01850 454 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CENPCQ03188 943 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 PTP4A2Q12974 167 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 NME3Q13232 169 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 E2F5Q15329 346 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 C5orf22Q49AR2 442 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 PITRM1Q5JRX3 1037 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 FAM102AQ5T9C2 384 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 STPG1Q5TH74 334 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TTC39BQ5VTQ0 682 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 FBXL22Q6P050 247 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CACUL1Q86Y37 369 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TMPRSS6Q8IU80 811 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 SYT12Q8IV01 421 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF683Q8IZ20 524 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CARNMT1Q8N4J0 409 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 OR52K2Q8NGK3 314 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 OR2T3Q8NH03 318 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 CPA5Q8WXQ8 436 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 PIGKQ92643 395 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 IGSF8Q969P0 613 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 C18orf8Q96DM3 657 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TBCBQ99426 244 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 MTG2Q9H4K7 406 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 ITM2CQ9NQX7 267 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 ARHGEF38Q9NXL2 777 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 WSB2Q9NYS7 404 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.7
SHMT2-224ENST00000556737 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 NCOR2Q9Y618 2525 aa10.67□□□□□ -0.7
SHMT2-224ENST00000556737 A0A1B0GVM2 712 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 TCAF2A6NFQ2 919 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms