RNA–Protein interactions for RNA: ENST00000556657.1

AL139099.3-201, humanhuman

TSL 3 BASIC

Gene AL139099.3, Length 401 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139099.3-201ENST00000556657 RTKNQ9BST9 563 aa13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 STIM2Q9P246 746 aa13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 TMEM59LQ9UK28 342 aa13.38□□□□□ -0.27
AL139099.3-201ENST00000556657 EPHB6O15197 1021 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 ENDOD1O94919 500 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 EPHX1P07099 455 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 SRPRAP08240 638 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 ATP1A3P13637 1013 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CHRNB2P17787 502 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 BCKDHBP21953 392 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CD70P32970 193 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 ST8SIA6P61647 398 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 FMO1Q01740 532 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 SULT2A1Q06520 285 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 NME3Q13232 169 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 PTPRNQ16849 979 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 RAP1GAP2Q684P5 730 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 SYT12Q8IV01 421 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 SIPA1Q96FS4 1042 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 ARHGEF38Q9NXL2 777 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 RAD54BQ9Y620 910 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
AL139099.3-201ENST00000556657 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 A0A1B0GVM2 712 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 TCAF2A6NFQ2 919 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 SLC30A4O14863 429 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 KHNYNO15037 678 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 PAGE1O75459 146 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 IGLV3-19P01714 112 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 FERP16591 822 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 TPM4P67936 248 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 LMAN2Q12907 356 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 FNDC3BQ53EP0 1204 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 PPP1R2P3Q6NXS1 205 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 FBXL22Q6P050 247 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 CADM4Q8NFZ8 388 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 CEP76Q8TAP6 659 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 ZNF419Q96HQ0 510 aaPredicted RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 HAPLN3Q96S86 360 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 FUCA2Q9BTY2 467 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 USP36Q9P275 1121 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 VPS13AQ96RL7 3174 aa13.36□□□□□ -0.27
AL139099.3-201ENST00000556657 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 NDUFS2O75306 463 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 CLDN11O75508 207 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 ACADMP11310 421 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 PRKCHP24723 683 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 CD6P30203 668 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 NNMTP40261 264 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 CSKP41240 450 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 NSFP46459 744 aaKnown RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 SULT1E1P49888 294 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 COPAP53621 1224 aa13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 RPL6Q02878 288 aaKnown RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 ZNF177Q13360 481 aaPredicted RBP13.35□□□□□ -0.27
AL139099.3-201ENST00000556657 NR1I3Q14994 352 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms