RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CWC15Q9P013 229 aaKnown RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 RNF14Q9UBS8 474 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 XPO7Q9UIA9 1087 aaKnown RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 FBXO10Q9UK96 956 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SNX12Q9UMY4 172 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 TBC1D30Q9Y2I9 924 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 HYOU1Q9Y4L1 999 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 NUMBLQ9Y6R0 609 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 MYOFQ9NZM1 2061 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 TICRRQ7Z2Z1 1910 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 hCG_1818297A0A087WSY0 165 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 LRRD1A4D1F6 860 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ESPNB1AK53 854 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 DCLK1O15075 740 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 CACNG3O60359 315 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ZNF189O75820 626 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 TPI1P60174 286 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 AMPD2Q01433 879 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 PFKPQ01813 784 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 TFF2Q03403 129 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 GAD2Q05329 585 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SLC12A1Q13621 1099 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 TFDP2Q14188 446 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 KRT81Q14533 505 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 PAFAH1B3Q15102 231 aaKnown RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SMTNL2Q2TAL5 461 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ATP13A4Q4VNC1 1196 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ODF2Q5BJF6 829 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 DCAF12L1Q5VU92 463 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 FYB2Q5VWT5 728 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SLC9A4Q6AI14 798 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SPOCD1Q6ZMY3 1216 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 LRRC49Q8IUZ0 686 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 LGI2Q8N0V4 545 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 C17orf53Q8N3J3 647 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 RAPGEF5Q92565 580 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 HSPH1Q92598 858 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 TMA16Q96EY4 203 aaKnown RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 PRICKLE1Q96MT3 831 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 RNF157Q96PX1 679 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ASB2Q96Q27 587 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 FRMD8P1Q9BZ68 369 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-212ENST00000556541 PLA2G2FQ9BZM2 168 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 STIM2Q9P246 746 aa11.61□□□□□ -0.55
FOXN3-212ENST00000556541 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 LUC7L3O95232 432 aaKnown RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 CYP17A1P05093 508 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 BMP1P13497 986 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 GOT1P17174 413 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 TGM2P21980 687 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 HOXD9P28356 352 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 EPHB2P29323 1055 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 SERPINB6P35237 376 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ETFBP38117 255 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 NR2C2P49116 596 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 NDST2P52849 883 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 YBEYP58557 167 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ZNF33AQ06730 810 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 KLF1Q13351 362 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 TDGQ13569 410 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 RUNX3Q13761 415 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 DHCR24Q15392 516 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 PREPLQ4J6C6 727 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 PPP6R3Q5H9R7 873 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 SEL1L2Q5TEA6 688 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 RHBDF2Q6PJF5 856 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 MFSD7Q6UXD7 560 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 BBS12Q6ZW61 710 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 KIAA0907Q7Z7F0 614 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 C14orf80Q86SX3 495 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ETFBKMTQ8IXQ9 262 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 UMODL1-AS1Q8N2C9 162 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 PYROXD2Q8N2H3 581 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 SLC44A3Q8N4M1 653 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ACTRT1Q8TDG2 376 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 MAIP1Q8WWC4 291 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ASIC4Q96FT7 647 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 OSBPL9Q96SU4 736 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 NAP1L3Q99457 506 aaPredicted RBP11.6□□□□□ -0.55
FOXN3-212ENST00000556541 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 HPS4Q9NQG7 708 aa11.6□□□□□ -0.55
FOXN3-212ENST00000556541 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms