RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-221ENST00000556534 MTMR4Q9NYA4 1195 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 NDUFAF4Q9P032 175 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 PI4KBQ9UBF8 816 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 RIPOR2Q9Y4F9 1068 aa5.15□□□□□ -1.59
SCFD1-221ENST00000556534 hCG_1642624A0A1W2PR95 340 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 FAM90A20PA6NIJ5 464 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 IFRD1O00458 451 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 CST5P28325 142 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 SERPINA4P29622 427 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 MMP13P45452 471 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 RCAN1P53805 252 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 PRKAA2P54646 552 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 SRSF1Q07955 248 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 POSTNQ15063 836 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 TIGD6Q17RP2 521 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 TBRG1Q3YBR2 411 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 C10orf25Q5T742 122 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 DGAT2L7PQ6IED9 249 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 C11orf87Q6NUJ2 197 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 TMEM88Q6PEY1 159 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 KIAA1324Q6UXG2 1013 aaKnown RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF793Q6ZN11 406 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 RRAGAQ7L523 313 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 MDGA2Q7Z553 956 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 PIP4P1Q86T03 277 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 CCDC117Q8IWD4 279 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 PAQR4Q8N4S7 273 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 DENND1AQ8TEH3 1009 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 CPT1BQ92523 772 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 C3orf49Q96BT1 292 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 NPAS1Q99742 590 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 SPRTNQ9H040 489 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 BRD8Q9H0E9 1235 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 SFXN1Q9H9B4 322 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 SEPSECSQ9HD40 501 aaKnown RBP5.14□□□□□ -1.59
SCFD1-221ENST00000556534 RCE1Q9Y256 329 aa5.14□□□□□ -1.59
SCFD1-221ENST00000556534 HMX3A6NHT5 357 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 USP12O75317 370 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 CD63P08962 238 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 CPA2P48052 419 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 PRKG1Q13976 671 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 RPS6KA2Q15349 733 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 KIAA1755Q5JYT7 1200 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 ZNF425Q6IV72 752 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 FAM57BQ71RH2 274 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 ARL14EPQ8N8R7 260 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-221ENST00000556534 C16orf52Q8NHV5 167 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 KAT2BQ92831 832 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 TRAPPC9Q96Q05 1148 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 PIMREGQ9BSJ6 248 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 SLC29A3Q9BZD2 475 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 ARHGAP39Q9C0H5 1083 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 OSBPL5Q9H0X9 879 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-221ENST00000556534 TXNRD2Q9NNW7 524 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 G6PC2Q9NQR9 355 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 RNF7Q9UBF6 113 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 ZMYM2Q9UBW7 1377 aa5.13□□□□□ -1.59
SCFD1-221ENST00000556534 MOSPD3O75425 235 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 FAM155BO75949 473 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 WNT1P04628 370 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 CYP19A1P11511 503 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-221ENST00000556534 STIM1Q13586 685 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 LIPMQ5VYY2 423 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 SHC4Q6S5L8 630 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 RINLQ6ZS11 566 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 ANKRD13BQ86YJ7 626 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 GALNT15Q8N3T1 639 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 THAP4Q8WY91 577 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 MYLK2Q9H1R3 596 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 PAPOLBQ9NRJ5 636 aaKnown RBP5.12□□□□□ -1.59
SCFD1-221ENST00000556534 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCFD1-221ENST00000556534 TMEM45AQ9NWC5 275 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 KCND3Q9UK17 655 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 PCDHA10Q9Y5I2 948 aa5.12□□□□□ -1.59
SCFD1-221ENST00000556534 A0A0G2JK05 382 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 F8W810 466 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 GRM8O00222 908 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 FGBP02675 491 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 ADD2P35612 726 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 DCTN1Q14203 1278 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 RBMS2Q15434 407 aaKnown RBP5.11□□□□□ -1.59
SCFD1-221ENST00000556534 SMAD1Q15797 465 aaKnown RBP5.11□□□□□ -1.59
SCFD1-221ENST00000556534 ANO1Q5XXA6 986 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 NANOGP1Q8N7R0 232 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 FAM47BQ8NA70 645 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 SMG7Q92540 1137 aaKnown RBP5.11□□□□□ -1.59
SCFD1-221ENST00000556534 TWSG1Q9GZX9 223 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 TNFRSF18Q9Y5U5 241 aa5.11□□□□□ -1.59
SCFD1-221ENST00000556534 TTBK1Q5TCY1 1321 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-221ENST00000556534 TRBV5-3A0A0A0MS03 114 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 LY6G6EA0A0G2JKS1 128 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 MCIDASD6RGH6 385 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PPEF2O14830 753 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PIP5K1CO60331 668 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PRF1P14222 555 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 ADPRHP54922 357 aa5.1□□□□□ -1.59
SCFD1-221ENST00000556534 PDCLQ13371 301 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms