RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RAP1GAP2Q684P5 730 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 ZNF776Q68DI1 518 aaPredicted RBP23.4■■□□□ 1.34
ACTN1-220ENST00000556433 MMS22LQ6ZRQ5 1243 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 C1orf216Q8TAB5 229 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 MYO19Q96H55 970 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 APEX2Q9UBZ4 518 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 TJP2Q9UDY2 1190 aa23.4■■□□□ 1.34
ACTN1-220ENST00000556433 NUMA1Q14980 2115 aa23.39■■□□□ 1.34
ACTN1-220ENST00000556433 USP24Q9UPU5 2620 aa23.39■■□□□ 1.34
ACTN1-220ENST00000556433 H0Y626 953 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 LUC7L3O95232 432 aaKnown RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 SEMA4FO95754 770 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 TACR2P21452 398 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 MTIF2P46199 727 aaKnown RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 BNC1Q01954 994 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 TRIP6Q15654 476 aaKnown RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 EXOC3L4Q17RC7 722 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 TTC31Q49AM3 519 aaPredicted RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 PITRM1Q5JRX3 1037 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 IL27RAQ6UWB1 636 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 CHSY1Q86X52 802 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 IRF2BP1Q8IU81 584 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 NAXDQ8IW45 347 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 WDTC1Q8N5D0 677 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 BTN2A3PQ96KV6 586 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 MRGPRX3Q96LB0 322 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 RSPH9Q9H1X1 276 aaPredicted RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 GAREM1Q9H706 876 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 IL21RQ9HBE5 538 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 KIAA1522Q9P206 1035 aaPredicted RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 SLC12A6Q9UHW9 1150 aa23.39■■□□□ 1.33
ACTN1-220ENST00000556433 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.39■■□□□ 1.33
ACTN1-220ENST00000556433 SIN3BO75182 1162 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 TRIM16O95361 564 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 MOCS3O95396 460 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 IGLV3-25P01717 112 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 PON1P27169 355 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 MATKP42679 507 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 CSNK1EP49674 416 aaKnown RBP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 PITX1P78337 314 aaPredicted RBP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 HNRNPA1L2Q32P51 320 aaKnown RBP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 DHX40Q8IX18 779 aaKnown RBP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 ATP6V0D2Q8N8Y2 350 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 MLKLQ8NB16 471 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 GANCQ8TET4 914 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 SHC3Q92529 594 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 TMEM121BQ9BXQ6 578 aaPredicted RBP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 SGK2Q9HBY8 427 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.38■■□□□ 1.33
ACTN1-220ENST00000556433 ERVW-1Q9UQF0 538 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 NCKAP1Q9Y2A7 1128 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 NEUROG3Q9Y4Z2 214 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 SLCO1B1Q9Y6L6 691 aa23.38■■□□□ 1.33
ACTN1-220ENST00000556433 A0A1B0GVT2 93 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 GTPBP10A4D1E9 387 aaKnown RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 RNASEH1O60930 286 aaKnown RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 FSBPO95073 299 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 CER1O95813 267 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 CTSOP43234 321 aaPredicted RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 AFF3P51826 1226 aaKnown RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 CDK17Q00537 523 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 TPD52L1Q16890 204 aaPredicted RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 ZNF423Q2M1K9 1284 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 HLA-BQ31612 363 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 PASD1Q8IV76 773 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 DEFB106AQ8N104 65 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 CHCHD4Q8N4Q1 142 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 KDM1BQ8NB78 822 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 BIRC7Q96CA5 298 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 PPP1R13BQ96KQ4 1090 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 PABPC3Q9H361 631 aaKnown RBP23.37■■□□□ 1.33
ACTN1-220ENST00000556433 FAM204AQ9H8W3 233 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 CEP83Q9Y592 693 aa23.37■■□□□ 1.33
ACTN1-220ENST00000556433 KNL1Q8NG31 2342 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 KCNU1A8MYU2 1149 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 F5H5T6 163 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 GLI1P08151 1106 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 SRPRAP08240 638 aaKnown RBP23.36■■□□□ 1.33
ACTN1-220ENST00000556433 PTK2Q05397 1052 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 EFHC1Q5JVL4 640 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 C9orf64Q5T6V5 341 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 APCDD1Q8J025 514 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 KDF1Q8NAX2 398 aaPredicted RBP23.36■■□□□ 1.33
ACTN1-220ENST00000556433 SETD7Q8WTS6 366 aaKnown RBP23.36■■□□□ 1.33
ACTN1-220ENST00000556433 GATA6Q92908 595 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 RNF34Q969K3 372 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 CPXM1Q96SM3 734 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 TM7SF3Q9NS93 570 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 FBXL12Q9NXK8 326 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 SLCO3A1Q9UIG8 710 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 KLK13Q9UKR3 277 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 ZMIZ1Q9ULJ6 1067 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 SCML1Q9UN30 329 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 PCDHGC3Q9UN70 934 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 MSRB2Q9Y3D2 182 aa23.36■■□□□ 1.33
ACTN1-220ENST00000556433 MUC22E2RYF6 1773 aaPredicted RBP23.36■■□□□ 1.33
ACTN1-220ENST00000556433 SYNJ2BP-COX16A0A087WUM0 186 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 TARSL2A2RTX5 802 aaKnown RBP23.35■■□□□ 1.33
ACTN1-220ENST00000556433 TTC34A8MYJ7 566 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 ZNF883P0CG24 379 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms