RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 CDH23Q9H251 3354 aa19.2■□□□□ 0.66
SDR39U1-218ENST00000556262 PPP1R12AO14974 1030 aaPredicted RBP19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 TLR5O60602 858 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 LINC00271P0C7V0 271 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 SLCO1A2P46721 670 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 GUCY1A3Q02108 690 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 MANEALQ5VSG8 457 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 CENPUQ71F23 418 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 PDZD4Q76G19 769 aaPredicted RBP19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 TLCD1Q96CP7 247 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 PGM2Q96G03 612 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ZBED2Q9BTP6 218 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 TMEM109Q9BVC6 243 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 PCDHB12Q9Y5F1 795 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 KCNK1O00180 336 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 RNF103O00237 685 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 FGF18O76093 207 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 APRTP07741 180 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ARL4CP56559 192 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ANKRD20A2Q5SQ80 823 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ANKRD20A1Q5TYW2 823 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ANKRD20A3Q5VUR7 823 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 TPGS2Q68CL5 300 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 CAPN12Q6ZSI9 719 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 ARHGEF18Q6ZSZ5 1173 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 UBE2OQ9C0C9 1292 aaKnown RBP19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 KLC2Q9H0B6 622 aa19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 OLA1Q9NTK5 396 aaKnown RBP19.19■□□□□ 0.66
SDR39U1-218ENST00000556262 SLC12A8A0AV02 714 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 E9PAM4 449 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 ALOX15BO15296 676 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 CHADO15335 359 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 AVILO75366 819 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 FAM107AO95990 144 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 HMGA1P17096 107 aaKnown RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 SYN1P17600 705 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 CA8P35219 290 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 TUBP50607 506 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 MLLT6P55198 1093 aaPredicted RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 HTRA4P83105 476 aaPredicted RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 WASHC5Q12768 1159 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 RAB33AQ14088 237 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 TMEM240Q5SV17 173 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 TTC19Q6DKK2 380 aaPredicted RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 CEP128Q6ZU80 1094 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 C7orf61Q8IZ16 206 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 PPM1EQ8WY54 764 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 ZNF512Q96ME7 567 aaPredicted RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 WDR83Q9BRX9 315 aaKnown RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 MRPL17Q9NRX2 175 aaKnown RBP19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 NDFIP2Q9NV92 336 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 MPP6Q9NZW5 540 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 YIPF1Q9Y548 306 aa19.18■□□□□ 0.66
SDR39U1-218ENST00000556262 A0A087WUV0 522 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 A0A0A0MRY4 1105 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 TEX28O15482 410 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 PPM1AP35813 382 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 TRIP4Q15650 581 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 LONRF1Q17RB8 773 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 TBC1D31Q96DN5 1066 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 SPATA13Q96N96 652 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 STMN4Q9H169 189 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 VANGL2Q9ULK5 521 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 CARNS1A5YM72 827 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 PRRG1O14668 218 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 APOEP02649 317 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 SLC2A3P11169 496 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 HOXC13P31276 330 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 HPDP32754 393 aaPredicted RBP19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 SERPINB6P35237 376 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 ALDH1A3P47895 512 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 GALNT2Q10471 571 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 NLRP14Q86W24 1093 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 PDIK1LQ8N165 341 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 NOVA2Q9UNW9 492 aaKnown RBP19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 FAM169AQ9Y6X4 670 aa19.17■□□□□ 0.66
SDR39U1-218ENST00000556262 CHD9Q3L8U1 2897 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 SMAPO00193 183 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 CSPG5O95196 566 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 GARSP41250 739 aaKnown RBP19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 PPIDQ08752 370 aaKnown RBP19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 TWF1Q12792 350 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 MS4A13Q5J8X5 152 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 YTHDF3Q7Z739 585 aaKnown RBP19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 ZNF567Q8N184 647 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 KLHL23Q8NBE8 558 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 ZNF473Q8WTR7 871 aaKnown RBP19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 CENPTQ96BT3 561 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 C1orf74Q96LT6 269 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 SERPINB12Q96P63 405 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 ZMYND8Q9ULU4 1186 aaPredicted RBP19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 INSL6Q9Y581 213 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 RAD54BQ9Y620 910 aa19.16■□□□□ 0.66
SDR39U1-218ENST00000556262 LCHNA4D1U4 455 aa19.15■□□□□ 0.66
SDR39U1-218ENST00000556262 ZNF840PA6NDX5 716 aa19.15■□□□□ 0.66
SDR39U1-218ENST00000556262 E7ESA3 106 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms