RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CPT1BQ92523 772 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 SEPT8Q92599 483 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 FAM149B1Q96BN6 582 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ZBTB9Q96C00 473 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 FUBP3Q96I24 572 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 OLFM3Q96PB7 478 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 KCNK16Q96T55 309 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ZCWPW1Q9H0M4 648 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 DHX35Q9H5Z1 703 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 WDR6Q9NNW5 1121 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 TMEM30AQ9NV96 361 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 TBC1D13Q9NVG8 400 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 GPATCH2LQ9NWQ4 482 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CALCOCO1Q9P1Z2 691 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 SLC12A6Q9UHW9 1150 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 FBXW11Q9UKB1 542 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 OGDHLQ9ULD0 1010 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 A0A087WUV0 522 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 I3L4J1 428 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 CAPN9O14815 690 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 NCAM2O15394 837 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 NBNO60934 754 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 ACSL3O95573 720 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 CXCL10P02778 98 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 USP17L7P0C7H9 530 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 BDNFP23560 247 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 MAGEA11P43364 429 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 MMP13P45452 471 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 CACNA2D1P54289 1103 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 SEC13P55735 322 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 SMARCB1Q12824 385 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 SEMA3BQ13214 749 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 DPYSQ14117 519 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 KCNJ11Q14654 390 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PAFAH1B3Q15102 231 aaKnown RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 ARL13BQ3SXY8 428 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PPP6R3Q5H9R7 873 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 BSPRYQ5W0U4 402 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 C1orf228Q6PIY5 440 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 VSTM1Q6UX27 236 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 NPNTQ6UXI9 565 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 LEKR1Q6ZMV7 388 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PDZD4Q76G19 769 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 GPRIN1Q7Z2K8 1008 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 ANKRD33Q7Z3H0 272 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 DCP1BQ8IZD4 617 aaKnown RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PDIK1LQ8N165 341 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 MCUQ8NE86 351 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 NDRG1Q92597 394 aaKnown RBP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 C8orf48Q96LL4 319 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 TOX2Q96NM4 488 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 QKIQ96PU8 341 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 TMEM175Q9BSA9 504 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 COLEC11Q9BWP8 271 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 BRD8Q9H0E9 1235 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 OSBPL2Q9H1P3 480 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 CENPHQ9H3R5 247 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 SAYSD1Q9NPB0 183 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PIGVQ9NUD9 493 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 TMLHEQ9NVH6 421 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 EURLQ9NYK6 297 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 IL37Q9NZH6 218 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 BCCIPQ9P287 314 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-235ENST00000556082 HCN4Q9Y3Q4 1203 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 PCDHB7Q9Y5E2 793 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 ACTL7BQ9Y614 415 aa8.57□□□□□ -1.04
ATXN3-235ENST00000556082 COL4A4P53420 1690 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 TLDC2A0PJX2 215 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 OR6C75A6NL08 312 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 TNFRSF10BO14763 440 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 KCNN4O15554 427 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 B4GALT3O60512 393 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 CDH16O75309 829 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SPAG6O75602 509 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 DKK1O94907 266 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 IGLV3-25P01717 112 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ITGB1P05556 798 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 FURINP09958 794 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 RBL1P28749 1068 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 LSP1P33241 339 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 HTR7P34969 479 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 CHRNA4P43681 627 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 GATA4P43694 442 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 GLUD2P49448 558 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SLC18A1P54219 525 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 GNGT1P63211 74 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 IFI35P80217 286 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 CDK16Q00536 496 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 GBE1Q04446 702 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 RNASELQ05823 741 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ELAVL2Q12926 359 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 PDK1Q15118 436 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ANKRD22Q5VYY1 191 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms