RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 SEMA3BQ13214 749 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 DPYSL3Q14195 570 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 DHCR24Q15392 516 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ATP13A4Q4VNC1 1196 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 LY6G5CQ5SRR4 150 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 FAM72AQ5TYM5 149 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 FAM72DQ6L9T8 149 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 FAM72BQ86X60 149 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 MFN1Q8IWA4 741 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 DNASE1L2Q92874 299 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 RNF25Q96BH1 459 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 XPO6Q96QU8 1125 aaKnown RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-223ENST00000555904 ECT2Q9H8V3 914 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 SORCS3Q9UPU3 1222 aa12.9□□□□□ -0.34
ABCD4-223ENST00000555904 IGLV3-10A0A075B6K4 115 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 ENC1O14682 589 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TYRP14679 529 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 RHOQP17081 205 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 OR1E1P30953 314 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 CASQ1P31415 396 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 OXCT1P55809 520 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 RPS24P62847 133 aaKnown RBP12.89□□□□□ -0.35
ABCD4-223ENST00000555904 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 MANEALQ5VSG8 457 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TMCO3Q6UWJ1 677 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TFAP2DQ7Z6R9 452 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 C14orf80Q86SX3 495 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
ABCD4-223ENST00000555904 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 ALG3Q92685 438 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 IGSF8Q969P0 613 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 PSMB7Q99436 277 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 CARD9Q9H257 536 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 TRPV5Q9NQA5 729 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
ABCD4-223ENST00000555904 MARK1Q9P0L2 795 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
ABCD4-223ENST00000555904 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 DRGXA6NNA5 263 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PENKP01210 267 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 CD48P09326 243 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 HOXC13P31276 330 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 SERPINB6P35237 376 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 ETFBP38117 255 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 CDKN2BP42772 138 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PEX5P50542 639 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 SGSHP51688 502 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 ARSEP51690 589 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 TFDP2Q14188 446 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 C5orf22Q49AR2 442 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 FYB2Q5VWT5 728 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 SPOCD1Q6ZMY3 1216 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 RFX6Q8HWS3 928 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 ZNF683Q8IZ20 524 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 GJD3Q8N144 294 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 TTC8Q8TAM2 541 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 TSC1Q92574 1164 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 WDR24Q96S15 920 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 SLC2A11Q9BYW1 496 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
ABCD4-223ENST00000555904 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
ABCD4-223ENST00000555904 ARNTLO00327 626 aa12.87□□□□□ -0.35
ABCD4-223ENST00000555904 GFRA2O00451 464 aa12.87□□□□□ -0.35
ABCD4-223ENST00000555904 APOL1O14791 398 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms