RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AOC1P19801 751 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MGAT1P26572 445 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 GRIA1P42261 906 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SLC1A6P48664 564 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 NIPAL4Q0D2K0 466 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 HIC1Q14526 733 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 INSCQ1MX18 579 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 KIZQ2M2Z5 673 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SOWAHAQ2M3V2 549 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 FAM182AQ5T1J6 154 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 C9orf57Q5W0N0 161 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TMEM154Q6P9G4 183 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 DLK2Q6UY11 383 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 RIPOR1Q6ZS17 1223 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 FAM131BQ86XD5 332 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 TREML1Q86YW5 311 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 ADGRF2Q8IZF7 708 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 NME8Q8N427 588 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 APPL2Q8NEU8 664 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CLEC4CQ8WTT0 213 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 FAM149B1Q96BN6 582 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 PGBD4Q96DM1 585 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SLC10A4Q96EP9 437 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 LGMNQ99538 433 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 ZNF184Q99676 751 aaPredicted RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 TRIM56Q9BRZ2 755 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 C16orf70Q9BSU1 422 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 CCDC106Q9BWC9 280 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 DPEP3Q9H4B8 488 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 ARHGEF4Q9NR80 690 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 MTMR10Q9NXD2 777 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 DNAJB4Q9UDY4 337 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 FZD10Q9ULW2 581 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 STAP1Q9ULZ2 295 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SOX13Q9UN79 622 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 DNAJC16Q9Y2G8 782 aa7.19□□□□□ -1.26
TDP1-213ENST00000555880 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.19□□□□□ -1.26
TDP1-213ENST00000555880 RRN3P2A6NIE6 340 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 EIF4E1BA6NMX2 242 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 KPNA7A9QM74 516 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 PRR5-ARHGAP8B1AHC4 643 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 XPO1O14980 1071 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 MFSD11O43934 449 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 PLIN3O60664 434 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 HUS1O60921 280 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 FKBP6O75344 327 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 DAB1O75553 588 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ALDOAP04075 364 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 ITGA2BP08514 1039 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 VAV1P15498 845 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CALRP27797 417 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 TYK2P29597 1187 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 GP5P40197 560 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 RPL34P49207 117 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 GLUD2P49448 558 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CDK7P50613 346 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 COPAP53621 1224 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ATXN1P54253 815 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 ACTR3P61158 418 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 RPL10AP62906 217 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 IRX1P78414 480 aaPredicted RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 CRADDP78560 199 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ARHGAP8P85298 464 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SNAPC2Q13487 334 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 PDE1CQ14123 709 aaPredicted RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 UBAP2LQ14157 1087 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 ZBTB6Q15916 424 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 DGKDQ16760 1214 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CCDC153Q494R4 210 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SV2CQ496J9 727 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 DCAF6Q58WW2 860 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CFAP157Q5JU67 520 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 GLRA4Q5JXX5 417 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SPANXN3Q5MJ09 141 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 TAPT1Q6NXT6 567 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SIX6OS1Q8N1H7 587 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CRYBG2Q8N1P7 616 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 GPRC5AQ8NFJ5 357 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SLC2A14Q8TDB8 520 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 RNF139Q8WU17 664 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 NRG4Q8WWG1 115 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 C18orf25Q96B23 403 aaPredicted RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 OPTNQ96CV9 577 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 P2RY11Q96G91 374 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ZMAT2Q96NC0 199 aaKnown RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 TSPAN18Q96SJ8 248 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 CPNE1Q99829 537 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 FAM49AQ9H0Q0 323 aaPredicted RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 VCX3BQ9H321 246 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ZNF395Q9H8N7 513 aaPredicted RBP7.18□□□□□ -1.26
TDP1-213ENST00000555880 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 GPAMQ9HCL2 828 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 ADAM28Q9UKQ2 775 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SCN4AP35499 1836 aa7.18□□□□□ -1.26
TDP1-213ENST00000555880 SYNJ2BP-COX16A0A087WUM0 186 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RBM47A0AV96 593 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 ARHGAP42A6NI28 874 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms