RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TTC17Q96AE7 1141 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 FERMT1Q9BQL6 677 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 KLHL8Q9P2G9 620 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-207ENST00000555497 PATJQ8NI35 1801 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 CCNFP41002 786 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 OVGP1Q12889 678 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 MBTPS1Q14703 1052 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 TRAF7Q6Q0C0 670 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 CYS1Q717R9 158 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 CHSY1Q86X52 802 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 SCML4Q8N228 414 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 UROC1Q96N76 676 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 TRPV6Q9H1D0 765 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 USH1CQ9Y6N9 552 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 DDHD2O94830 711 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 OR4Q2P0C623 313 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 EPHB2P29323 1055 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 LGSNQ5TDP6 509 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 CYB5D1Q6P9G0 228 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 PDZD4Q76G19 769 aaPredicted RBP24.93■■□□□ 1.58
TMEM260-207ENST00000555497 AGAP3Q96P47 875 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 MYLK2Q9H1R3 596 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 NPHS2Q9NP85 383 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 FRMPD3Q5JV73 1810 aa24.93■■□□□ 1.58
TMEM260-207ENST00000555497 ZBTB24O43167 697 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-207ENST00000555497 CKBP12277 381 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 BGNP21810 368 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 CD68P34810 354 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-207ENST00000555497 NIPAL4Q0D2K0 466 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 CCDC15Q0P6D6 951 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 ZBTB17Q13105 803 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 EIF4EBP2Q13542 120 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-207ENST00000555497 SMAD1Q15797 465 aaKnown RBP24.92■■□□□ 1.58
TMEM260-207ENST00000555497 THEM5Q8N1Q8 247 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 SLC13A1Q9BZW2 595 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 KANSL3Q9P2N6 904 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 PLLPQ9Y342 182 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 RAD54BQ9Y620 910 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 INPPL1O15357 1258 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 AOC2O75106 756 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 USP12O75317 370 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 KRT38O76015 456 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 IGLV3-25P01717 112 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 SKIP12755 728 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 SERPINB4P48594 390 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 GALNT2Q10471 571 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 CES3Q6UWW8 571 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 TBC1D1Q86TI0 1168 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-207ENST00000555497 OR52K1Q8NGK4 314 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 LINC01599Q8WXQ3 324 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 EPAS1Q99814 870 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 TRIM33Q9UPN9 1127 aa24.92■■□□□ 1.58
TMEM260-207ENST00000555497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.91■■□□□ 1.58
TMEM260-207ENST00000555497 ALDH1A1P00352 501 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 GARSP41250 739 aaKnown RBP24.91■■□□□ 1.58
TMEM260-207ENST00000555497 KCNJ2P63252 427 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 CRYMQ14894 314 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 CLLU1OSQ5K130 101 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 RFWD2Q8NHY2 731 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 RNF34Q969K3 372 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 HDAC11Q96DB2 347 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 CELF6Q96J87 481 aaKnown RBP24.91■■□□□ 1.58
TMEM260-207ENST00000555497 RGS18Q9NS28 235 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 IL1RAPL1Q9NZN1 696 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 NEU3Q9UQ49 428 aa24.91■■□□□ 1.58
TMEM260-207ENST00000555497 TNFRSF10BO14763 440 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 PGAM1P18669 254 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 GTF2A1P52655 376 aaPredicted RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 ELF3P78545 371 aaPredicted RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 TSPY1Q01534 308 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 SP3Q02447 781 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 PLCD3Q8N3E9 789 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 MTBPQ96DY7 904 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 MECRQ9BV79 373 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 NCAM2O15394 837 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 TOP3BO95985 862 aaKnown RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 TYMPP19971 482 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 SLC5A3P53794 718 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 MAP3K21Q5TCX8 1036 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 MARK2Q7KZI7 788 aaKnown RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 STKLD1Q8NE28 680 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 ZSCAN18Q8TBC5 510 aaPredicted RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 ERP27Q96DN0 273 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 MLPHQ9BV36 600 aaPredicted RBP24.9■■□□□ 1.58
TMEM260-207ENST00000555497 PCMTD2Q9NV79 361 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 PSAT1Q9Y617 370 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 NUMBLQ9Y6R0 609 aa24.9■■□□□ 1.58
TMEM260-207ENST00000555497 YWHAHQ04917 246 aaPredicted RBP24.89■■□□□ 1.58
TMEM260-207ENST00000555497 MAPRE1Q15691 268 aaKnown RBP24.89■■□□□ 1.58
TMEM260-207ENST00000555497 ARTNQ5T4W7 220 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 SCD5Q86SK9 330 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 RNF180Q86T96 592 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 DPF3Q92784 378 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 TSSK1BQ9BXA7 367 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 PCDHB8Q9UN66 801 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 SQORQ9Y6N5 450 aa24.89■■□□□ 1.58
TMEM260-207ENST00000555497 SRGAP2BP0DMP2 458 aa24.89■■□□□ 1.57
TMEM260-207ENST00000555497 SERPINB9P50453 376 aa24.89■■□□□ 1.57
TMEM260-207ENST00000555497 CES4AQ5XG92 561 aa24.89■■□□□ 1.57
TMEM260-207ENST00000555497 KCTD11Q693B1 232 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms