RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FKBP15Q5T1M5 1219 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 OR6B2Q6IFH4 312 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 TCEAL6Q6IPX3 200 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 FAM183BPQ6ZVS7 135 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 CHSY1Q86X52 802 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 ADAM32Q8TC27 787 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 NT5C3BQ969T7 300 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 C18orf8Q96DM3 657 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 NUCKS1Q9H1E3 243 aaKnown RBP12.25□□□□□ -0.45
VRK1-204ENST00000555351 SMOC1Q9H4F8 434 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 FAM204AQ9H8W3 233 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 TMEM74BQ9NUR3 256 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 DDIT4Q9NX09 232 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 SCML1Q9UN30 329 aa12.25□□□□□ -0.45
VRK1-204ENST00000555351 A0A1B0GVM2 712 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 TARSL2A2RTX5 802 aaKnown RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 TCAF2A6NFQ2 919 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 UPK3BL1B0FP48 263 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 UPK3BL2E5RIL1 263 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 CDX4O14627 284 aaPredicted RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 MOCS2O96007 188 aaPredicted RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 ACADMP11310 421 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 PLK1P53350 603 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 IRX4P78413 519 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 SULT2A1Q06520 285 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 C5orf22Q49AR2 442 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 HSP90AA4PQ58FG1 418 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 BRMS1LQ5PSV4 323 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 ITIH6Q6UXX5 1313 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 ERICH1Q86X53 443 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 SLC41A1Q8IVJ1 513 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 WFDC5Q8TCV5 224 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 EPS8L1Q8TE68 723 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 SORCS1Q8WY21 1168 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 TOE1Q96GM8 510 aaKnown RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 MYO19Q96H55 970 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 NPY6RQ99463 290 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 GANQ9H2C0 597 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 PDCL3Q9H2J4 239 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 CAPN10Q9HC96 672 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 TAB2Q9NYJ8 693 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 STIM2Q9P246 746 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
VRK1-204ENST00000555351 STAP1Q9ULZ2 295 aa12.24□□□□□ -0.45
VRK1-204ENST00000555351 C4orf47A7E2U8 309 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 PATE3B3GLJ2 98 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 H0Y626 953 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 SYPP08247 313 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 PNMA6AP0CW24 399 aaPredicted RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 GNSP15586 552 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 ENGP17813 658 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 CSKP41240 450 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 CXCR3P49682 368 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 JAM2P57087 298 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 PITX1P78337 314 aaPredicted RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 GFPT1Q06210 699 aaPredicted RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 HNRNPA1L2Q32P51 320 aaKnown RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 SLC25A52Q3SY17 297 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 PITRM1Q5JRX3 1037 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 TRIM72Q6ZMU5 477 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 USP30Q70CQ3 517 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 ARMCX6Q7L4S7 300 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 CARNMT1Q8N4J0 409 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 CYB5D2Q8WUJ1 264 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 RNF34Q969K3 372 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 MYEOVQ96EZ4 313 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 HSPA12BQ96MM6 686 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 ZDHHC5Q9C0B5 715 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 VPS16Q9H269 839 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 PRSS16Q9NQE7 514 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
VRK1-204ENST00000555351 XPO7Q9UIA9 1087 aaKnown RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
VRK1-204ENST00000555351 SIK3Q9Y2K2 1263 aa12.23□□□□□ -0.45
VRK1-204ENST00000555351 SDK1Q7Z5N4 2213 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 LGALS16A8MUM7 142 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 METTL12A8MUP2 240 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 M0QYT0 321 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 CLDN11O75508 207 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 HLA-EP13747 358 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 ZNF18P17022 549 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 COPB1P53618 953 aaKnown RBP12.22□□□□□ -0.45
VRK1-204ENST00000555351 RPS14P62263 151 aaKnown RBP12.22□□□□□ -0.45
VRK1-204ENST00000555351 NOMO3P69849 1222 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 CDR2Q01850 454 aa12.22□□□□□ -0.45
VRK1-204ENST00000555351 AUHQ13825 339 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms