RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 SLC8A3P57103 927 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
TUBB3-207ENST00000554927 PPP3CAQ08209 521 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 ILKQ13418 452 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 STIM1Q13586 685 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 LY6DQ14210 128 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 TAS1R2Q8TE23 839 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
TUBB3-207ENST00000554927 PNPLA8Q9NP80 782 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 SUN2Q9UH99 717 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 CKAP5Q14008 2032 aa13.79□□□□□ -0.2
TUBB3-207ENST00000554927 COL5A1P20908 1838 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 MGAQ8IWI9 3026 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 SPTA1P02549 2419 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 SLC28A2O43868 658 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 C6P13671 934 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 HOXD9P28356 352 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 MXI1P50539 228 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 GALCP54803 685 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 INCA1Q0VD86 236 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 BNIP3Q12983 259 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 PNOCQ13519 176 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 TCERG1LQ5VWI1 586 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 MBLAC2Q68D91 279 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 AHI1Q8N157 1196 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 ARHGAP18Q8N392 663 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 FBXL13Q8NEE6 735 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 WBP1Q96G27 269 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 HEXIM2Q96MH2 286 aaKnown RBP13.78□□□□□ -0.2
TUBB3-207ENST00000554927 SEMA4CQ9C0C4 833 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
TUBB3-207ENST00000554927 A0A1W2PP55 124 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 RNASEH2AO75792 299 aaKnown RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 WISP1O95388 367 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 MT-CO3P00414 261 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 PPP1R2P41236 205 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 ADIPOR2Q86V24 386 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 DHX40Q8IX18 779 aaKnown RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 DCBLD1Q8N8Z6 715 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 PLD4Q96BZ4 506 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 TMA16Q96EY4 203 aaKnown RBP13.77□□□□□ -0.21
TUBB3-207ENST00000554927 SERAC1Q96JX3 654 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 TIGD1Q96MW7 591 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 OMDQ99983 421 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 MTG2Q9H4K7 406 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 SERGEFQ9UGK8 458 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 SCML1Q9UN30 329 aa13.77□□□□□ -0.21
TUBB3-207ENST00000554927 MYH10P35580 1976 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 TLR4O00206 839 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 PSMA7O14818 248 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 WNT9AO14904 365 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 MID1O15344 667 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 KLK10O43240 276 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 MPOP05164 745 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 PRCPP42785 496 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 NXPH1P58417 271 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 YWHAEP62258 255 aaKnown RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 DAB2P98082 770 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 LRRC63Q05C16 580 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 PDE4CQ08493 712 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 PKDCCQ504Y2 493 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 ZNF394Q53GI3 561 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 FAM217AQ8IXS0 508 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 OXR1Q8N573 874 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 OR2T34Q8NGX1 318 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 EEF2KMTQ96G04 330 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 ZNF578Q96N58 590 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 RSPH9Q9H1X1 276 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 NEUROG2Q9H2A3 272 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
TUBB3-207ENST00000554927 PCDHB1Q9Y5F3 818 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms