RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 FAM133BQ5BKY9 247 aaKnown RBP14.8□□□□□ -0.04
SHOX2-206ENST00000554685 NCBP2-AS2Q69YL0 99 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 ZNF683Q8IZ20 524 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 MMGT1Q8N4V1 131 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 RTL3Q8N8U3 475 aaKnown RBP14.8□□□□□ -0.04
SHOX2-206ENST00000554685 PRELID2Q8N945 189 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 SMRP1Q8NCR6 262 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 CCDC26Q8TAB7 109 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 GRK7Q8WTQ7 553 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 SMARCD2Q92925 531 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 HAUS1Q96CS2 278 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 FERMT1Q9BQL6 677 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 LRRC19Q9H756 370 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 TRPV4Q9HBA0 871 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 RBM12Q9NTZ6 932 aaKnown RBP14.8□□□□□ -0.04
SHOX2-206ENST00000554685 DENND4CQ5VZ89 1909 aa14.8□□□□□ -0.04
SHOX2-206ENST00000554685 GREM1O60565 184 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CLDN11O75508 207 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 PRAMEF12O95522 483 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CYBBP04839 570 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 FOSL2P15408 326 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 MX2P20592 715 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 LTBRP36941 435 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 OTUD4Q01804 1114 aaKnown RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 DLX2Q07687 328 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 ADCY2Q08462 1091 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 XRCC4Q13426 336 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CBX2Q14781 532 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CHST9Q7L1S5 443 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 MAATS1Q7Z4T9 603 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 C14orf80Q86SX3 495 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CCDC117Q8IWD4 279 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 TTC16Q8NEE8 873 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 ACTL9Q8TC94 416 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 MYLIPQ8WY64 445 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 ZSWIM3Q96MP5 696 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 ASB16Q96NS5 453 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 CDX2Q99626 313 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-206ENST00000554685 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 TMEM248Q9NWD8 314 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 NEU3Q9UQ49 428 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 HEY1Q9Y5J3 304 aa14.79□□□□□ -0.04
SHOX2-206ENST00000554685 TRIOBPQ9H2D6 2365 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 GOLGA6L7A0A1B0GV03 622 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 A0A1B0GVM2 712 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 CFAP69A5D8W1 941 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 TCAF2A6NFQ2 919 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 HACD1B0YJ81 288 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 PPP1R12AO14974 1030 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 LIASO43766 372 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 SLC6A4P31645 630 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 COILP38432 576 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 NDST2P52849 883 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 VCPP55072 806 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 CDH4P55283 916 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 EIF3EP60228 445 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 ZXDBP98169 803 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 DHX34Q14147 1143 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 PDK1Q15118 436 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 MPPE1Q53F39 396 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 GLE1Q53GS7 698 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 HABP4Q5JVS0 413 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 MPP7Q5T2T1 576 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 C8orf74Q6P047 294 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 NLRP14Q86W24 1093 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 LRRC49Q8IUZ0 686 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 KLHL7Q8IXQ5 586 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 CCDC105Q8IYK2 499 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 ZNF557Q8N988 423 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 TDRD5Q8NAT2 981 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 C1orf54Q8WWF1 131 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 NKD2Q969F2 451 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 WBP2Q969T9 261 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 SMG9Q9H0W8 520 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 THG1LQ9NWX6 298 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 CCL26Q9Y258 94 aa14.78□□□□□ -0.04
SHOX2-206ENST00000554685 DRG1Q9Y295 367 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 R3HDM2Q9Y2K5 976 aaKnown RBP14.78□□□□□ -0.04
SHOX2-206ENST00000554685 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
SHOX2-206ENST00000554685 H7C0C1 242 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 MFSD11O43934 449 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 GAS8O95995 478 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 PECAM1P16284 738 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 GBP2P32456 591 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 ATP5OP48047 213 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 YBEYP58557 167 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 GBE1Q04446 702 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 SKIV2LQ15477 1246 aaKnown RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 FAM78AQ5JUQ0 283 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 C6orf118Q5T5N4 469 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.05
SHOX2-206ENST00000554685 CCDC137Q6PK04 289 aaKnown RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 SYDE1Q6ZW31 735 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-206ENST00000554685 OTOP3Q7RTS5 596 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms