RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BDP1A6H8Y1 2624 aa4.56□□□□□ -1.68
VTI1B-203ENST00000554636 VWA8A3KMH1 1905 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 MYH15Q9Y2K3 1946 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 LRRIQ4A6NIV6 560 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 HIDE1A8MVS5 230 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 NT5C1B-RDH14C9J2C7 533 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 H3BQV1 296 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ZC3H11AO75152 810 aaKnown RBP eCLIP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 STC2O76061 302 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DDHD2O94830 711 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF202O95125 648 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FKBP9O95302 570 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PRKCBP05771 671 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 VSIG10L2P0DP72 767 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 CTSAP10619 480 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 CDC25AP30304 524 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 MLH1P40692 756 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 NDUFV1P49821 464 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SCNN1GP51170 649 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DSC1Q08554 894 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 COASYQ13057 564 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 RESTQ13127 1097 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 LRRC32Q14392 662 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PDIA5Q14554 519 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SMC1AQ14683 1233 aaKnown RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PTPN14Q15678 1187 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FAM214AQ32MH5 1076 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 TMEM119Q4V9L6 283 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 MIIPQ5JXC2 388 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 HYIQ5T013 277 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FKBP15Q5T1M5 1219 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SYCE2Q6PIF2 218 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FAM111BQ6SJ93 734 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 TMEM184AQ6ZMB5 413 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FKBP9P1Q75LS8 142 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 RBM23Q86U06 439 aaKnown RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 C11orf74Q86VG3 221 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 CDR2LQ86X02 465 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF280BQ86YH2 543 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ZBTB8OSQ8IWT0 167 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ELOA2Q8IYF1 753 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 COLGALT2Q8IYK4 626 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 RNF168Q8IYW5 571 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DAW1Q8N136 415 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SMRP1Q8NCR6 262 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 CNNM3Q8NE01 707 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DEPTORQ8TB45 409 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 URGCPQ8TCY9 931 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 LRRC15Q8TF66 581 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SUSD6Q92537 303 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 IGSF21Q96ID5 467 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 GAD1Q99259 594 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 HERC2P3Q9BVR0 1158 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 RAB34Q9BZG1 259 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 HAPLN2Q9GZV7 340 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 C2orf40Q9H1Z8 148 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 BHMT2Q9H2M3 363 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 FZD8Q9H461 694 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 NXF3Q9H4D5 531 aaKnown RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PDZD7Q9H5P4 517 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 TLE6Q9H808 572 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ENTPD7Q9NQZ7 604 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DDX19AQ9NUU7 478 aaKnown RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PRMT7Q9NVM4 692 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 MIOSQ9NXC5 875 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DNAJB4Q9UDY4 337 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 LRWD1Q9UFC0 647 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PDCD11Q14690 1871 aaKnown RBP4.55□□□□□ -1.68
VTI1B-203ENST00000554636 DENND4AQ7Z401 1863 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 TECTAO75443 2155 aa4.55□□□□□ -1.68
VTI1B-203ENST00000554636 PLXNA3P51805 1871 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PHLPP2Q6ZVD8 1323 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 A0A1B0GUA9 196 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PRSS38A1L453 326 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 FSD2A1L4K1 749 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PMS2P1A4D2B8 440 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 VWA3AA6NCI4 1184 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ARL5CA6NH57 179 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 E9PMD0 336 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 F8W810 466 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PI4K2BG5E9Z4 385 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ACKR2O00590 384 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PTGESO14684 152 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 NRP1O14786 923 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KDM1AO60341 852 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 RECQL4O94761 1208 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 FSBPO95073 299 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 POMCP01189 267 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 JUNP05412 331 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 AKAP5P24588 427 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 LSP1P33241 339 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ACVRL1P37023 503 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KIR2DL3P43628 341 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 LSSP48449 732 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ALDH7A1P49419 539 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 SLC12A3P55017 1021 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms