RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 C1orf54Q8WWF1 131 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PRPF31Q8WWY3 499 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CPA5Q8WXQ8 436 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SAAL1Q96ER3 474 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NAF1Q96HR8 494 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ZBTB45Q96K62 511 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ZMAT2Q96NC0 199 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 BTBD2Q9BX70 525 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 OXCT2Q9BYC2 517 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SEZ6LQ9BYH1 1024 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 S100A14Q9HCY8 104 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SPATS2LQ9NUQ6 558 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 RNF19AQ9NV58 838 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PIM2Q9P1W9 311 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PTBP2Q9UKA9 531 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TRHDEQ9UKU6 1024 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MAFFQ9ULX9 164 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TMCO1Q9UM00 188 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 JAG2Q9Y219 1238 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TSC22D4Q9Y3Q8 395 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 IQANK1A0A1B0GTG1 560 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RRN3P2A6NIE6 340 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RIMBP2O15034 1052 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 VILLO15195 856 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SMAD6O43541 496 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 GLRA3O75311 464 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 BMP10O95393 424 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 METTL18O95568 372 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CFBP00751 764 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NFICP08651 508 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 BMP2P12643 396 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TCF3P15923 654 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ATP2A2P16615 1042 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ITGAXP20702 1163 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CCNCP24863 283 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ALDH3A1P30838 453 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 POLR2BP30876 1174 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PIK3CAP42336 1068 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 IDH3AP50213 366 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 EIF6P56537 245 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ITGA7Q13683 1181 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 VGLL4Q14135 290 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NBPF12Q5TAG4 269 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 JADE1Q6IE81 842 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM86AQ8N2M4 240 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 LZTR1Q8N653 840 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PPM1NQ8N819 430 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RNF169Q8NCN4 708 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KLHDC9Q8NEP7 349 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TCP10LQ8TDR4 215 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TFB1MQ8WVM0 346 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ATG4AQ8WYN0 398 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 DLG3Q92796 817 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 STAMBPL1Q96FJ0 436 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PRR11Q96HE9 360 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 FAM213AQ9BRX8 229 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TTLL2Q9BWV7 592 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 DUSP16Q9BY84 665 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 YTHDF1Q9BYJ9 559 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CWH43Q9H720 699 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TBC1D13Q9NVG8 400 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NMRK1Q9NWW6 199 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 GIN1Q9NXP7 522 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NFKBIL1Q9UBC1 381 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TJP2Q9UDY2 1190 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PHF24Q9UPV7 400 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TP53BP1Q12888 1972 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 A8MUI8 341 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SLCO1B7G3V0H7 640 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 AMHP03971 560 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 COL6A1P12109 1028 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 HSD17B1P14061 328 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 GNL1P36915 607 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MAGEA11P43364 429 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TUBP50607 506 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 UBXN2AP68543 259 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 DSC1Q08554 894 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 BST2Q10589 180 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 STX3Q13277 289 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KPNB1Q14974 876 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 EFTUD2Q15029 972 aaKnown RBP eCLIP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CDKN3Q16667 212 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KHDC1Q4VXA5 237 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 XKR9Q5GH70 373 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TOR1AIP1Q5JTV8 583 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CDKL4Q5MAI5 379 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGEF16Q5VV41 709 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 EEF1DP3Q658K8 133 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 IQSEC1Q6DN90 963 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SPOPLQ6IQ16 392 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SWSAP1Q6NVH7 229 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 LLGL2Q6P1M3 1020 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 DARS2Q6PI48 645 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 FASTKD5Q7L8L6 764 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PRUNE1Q86TP1 453 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NIM1KQ8IY84 436 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 UMODL1-AS1Q8N2C9 162 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC24Q8N4L8 307 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms