RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 YIPF3Q9GZM5 350 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 DRC3Q9H069 523 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 TRPV6Q9H1D0 765 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 BRD9Q9H8M2 597 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 KANSL2Q9H9L4 492 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 DBNDD1Q9H9R9 158 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 VCX3AQ9NNX9 186 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 DMAP1Q9NPF5 467 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-227ENST00000554491 INTS7Q9NVH2 962 aaKnown RBP4.66□□□□□ -1.66
ATXN3-227ENST00000554491 ATAD3AQ9NVI7 634 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 PPP1R14DQ9NXH3 145 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 SUCLA2Q9P2R7 463 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-227ENST00000554491 MYO1AQ9UBC5 1043 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 INTUQ9ULD6 942 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 KIAA1257Q9ULG3 409 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 RIMKLBQ9ULI2 386 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 CAPN7Q9Y6W3 813 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 FAM169AQ9Y6X4 670 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 MUC6Q6W4X9 2439 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 UBN2Q6ZU65 1347 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 SH3TC1Q8TE82 1336 aa4.66□□□□□ -1.66
ATXN3-227ENST00000554491 LTBP2Q14767 1821 aa4.65□□□□□ -1.66
ATXN3-227ENST00000554491 GPR75-ASB3A0A0A6YYF3 556 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 LRRD1A4D1F6 860 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 LRRC72A6NJI9 287 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PRRT4C9JH25 899 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 MASP2O00187 686 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 LEFTY2O00292 366 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 STRNO43815 780 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ECE2O60344 883 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CBFA2T3O75081 653 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 NCR1O76036 304 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 KRT14P02533 472 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ZFYP08048 801 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 LINGO3P0C6S8 592 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ALAS1P13196 640 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CASTP20810 708 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 MTHFRP42898 656 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 NR2C2P49116 596 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CLK3P49761 638 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 SERPINB8P50452 374 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 GNAI1P63096 354 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 UBXN1Q04323 297 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 NIPAL4Q0D2K0 466 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 MRPL49Q13405 166 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ANKRD1Q15327 319 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 HLFQ16534 295 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 INSCQ1MX18 579 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CFAP100Q494V2 611 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CEP78Q5JTW2 689 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ZBTB41Q5SVQ8 909 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 GKAP1Q5VSY0 366 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 METTL11BQ5VVY1 283 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 FAM109BQ6ICB4 259 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 NEK5Q6P3R8 708 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 SLC2A7Q6PXP3 512 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 C16orf54Q6UWD8 224 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CRELD2Q6UXH1 353 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PPP1R21Q6ZMI0 780 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC129Q6ZRS4 1044 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 UBE2R2Q712K3 238 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 RTL10Q7L3V2 364 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 FAM83AQ86UY5 434 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 DDX42Q86XP3 938 aaKnown RBP eCLIP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ADGRG3Q86Y34 549 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC83Q8IWF9 413 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 SCYL3Q8IZE3 742 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 GLB1L3Q8NCI6 653 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PPHLN1Q8NEY8 458 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC148Q8NFR7 591 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 LPIN2Q92539 896 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 MAELQ96JY0 434 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 COG8Q96MW5 612 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 FNBP1Q96RU3 617 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PRPF18Q99633 342 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PDCD2LQ9BRP1 358 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 AIFM2Q9BRQ8 373 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 TEX101Q9BY14 249 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 WDR11Q9BZH6 1224 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 GOLPH3LQ9H4A5 285 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PRDM13Q9H4Q3 707 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PREBQ9HCU5 417 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 TBCCD1Q9NVR7 557 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 TRPM5Q9NZQ8 1165 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 MTRF1LQ9UGC7 380 aaKnown RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 GGA2Q9UJY4 613 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ZMYND8Q9ULU4 1186 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ASB3Q9Y575 518 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 PCDHB6Q9Y5E3 794 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ATP6V1DQ9Y5K8 247 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 SLC4A4Q9Y6R1 1079 aa4.65□□□□□ -1.67
ATXN3-227ENST00000554491 ARAP2Q8WZ64 1704 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 SPECC1L-ADORA2AF8WAN1 911 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 AP3B1O00203 1094 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 KMOO15229 486 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 TACC1O75410 805 aa4.64□□□□□ -1.67
ATXN3-227ENST00000554491 CDC45O75419 566 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms