RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 LUC7L3O95232 432 aaKnown RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 APOEP02649 317 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 CD59P13987 128 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 TACR2P21452 398 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 KRT9P35527 623 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 RPS14P62263 151 aaKnown RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 PITX1P78337 314 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 PLEKHG6Q3KR16 790 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 VWA3BQ502W6 1294 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 MIIPQ5JXC2 388 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 DCAF12L1Q5VU92 463 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 CCDC117Q8IWD4 279 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 LGI2Q8N0V4 545 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 DEFB106AQ8N104 65 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 CFAP52Q8N1V2 620 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 CARNMT1Q8N4J0 409 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF366Q8N895 744 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 DEFB124Q8NES8 71 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 PRICKLE1Q96MT3 831 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 PRMT1Q99873 361 aaKnown RBP11.51□□□□□ -0.57
ABCD4-221ENST00000554453 WASF3Q9UPY6 502 aa11.51□□□□□ -0.57
ABCD4-221ENST00000554453 ARID1BQ8NFD5 2236 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 MEI4A8MW99 385 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 H0Y626 953 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 HSF2BPO75031 334 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 MOCS3O95396 460 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 MOCS2O96007 188 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 SRPRAP08240 638 aaKnown RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 ACSL1P33121 698 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 CSKP41240 450 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 PLK1P53350 603 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 SLC6A3Q01959 620 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF252P-AS1Q0IIN9 211 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 MTA1Q13330 715 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 SLC12A1Q13621 1099 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 HNRNPA1L2Q32P51 320 aaKnown RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 RAP1GAP2Q684P5 730 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 OR6B2Q6IFH4 312 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF397Q8NF99 534 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 MRGPRX3Q96LB0 322 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 RSPH9Q9H1X1 276 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 EIF2B4Q9UI10 523 aaKnown RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 DACH1Q9UI36 760 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 SLCO3A1Q9UIG8 710 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-221ENST00000554453 SCML1Q9UN30 329 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 DOCK9Q9BZ29 2069 aa11.5□□□□□ -0.57
ABCD4-221ENST00000554453 BCAT2O15382 392 aaPredicted RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 DNTTP04053 509 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 ABCB4P21439 1286 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 CCR1P32246 355 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 CDH5P33151 784 aaPredicted RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 NOS2P35228 1153 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 OXCT1P55809 520 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 ECT2LQ008S8 904 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 CDH18Q13634 790 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 DRAP1Q14919 205 aaPredicted RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 C9orf64Q5T6V5 341 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 KLHDC7AQ5VTJ3 777 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 ZNF776Q68DI1 518 aaPredicted RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 FBXL22Q6P050 247 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 USP30Q70CQ3 517 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 SLC26A9Q7LBE3 791 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 FAM124AQ86V42 546 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 SLC47A2Q86VL8 602 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 CHSY1Q86X52 802 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 ZDHHC17Q8IUH5 632 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 APCDD1Q8J025 514 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 C1orf131Q8NDD1 294 aaKnown RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 OR2I1PQ8NGU4 316 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 BTBD1Q9H0C5 482 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 MIR1-1HGQ9H1L0 117 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 NUP62CLQ9H1M0 184 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 MTG2Q9H4K7 406 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 SGK2Q9HBY8 427 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 OSGEPQ9NPF4 335 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 SAMSN1Q9NSI8 373 aaKnown RBP11.49□□□□□ -0.57
ABCD4-221ENST00000554453 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 RRN3Q9NYV6 651 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 NCKAP1Q9Y2A7 1128 aa11.49□□□□□ -0.57
ABCD4-221ENST00000554453 TTC34A8MYJ7 566 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 F5H5T6 163 aa11.48□□□□□ -0.57
ABCD4-221ENST00000554453 RNASEH1O60930 286 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms