RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CYP26A1O43174 497 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 TLR5O60602 858 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 PMS1P54277 932 aaKnown RBP17.64■□□□□ 0.41
NEK9-204ENST00000554258 NXPH1P58417 271 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 RPS14P62263 151 aaKnown RBP17.64■□□□□ 0.41
NEK9-204ENST00000554258 LRRC63Q05C16 580 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 ZNF211Q13398 564 aaPredicted RBP17.64■□□□□ 0.41
NEK9-204ENST00000554258 HS1BP3Q53T59 392 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 SCARA3Q6AZY7 606 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 TTI2Q6NXR4 508 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 DPH6Q7L8W6 267 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 CBWD1Q9BRT8 395 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 KLF16Q9BXK1 252 aaPredicted RBP17.64■□□□□ 0.41
NEK9-204ENST00000554258 ELOVL4Q9GZR5 314 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 ABCG4Q9H172 646 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 SLC25A18Q9H1K4 315 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 RWDD2AQ9UIY3 292 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 ITGA11Q9UKX5 1188 aa17.64■□□□□ 0.41
NEK9-204ENST00000554258 CALUO43852 315 aaPredicted RBP17.63■□□□□ 0.41
NEK9-204ENST00000554258 SDC3O75056 442 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
NEK9-204ENST00000554258 RBP5P82980 135 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 PAK1Q13153 545 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 STX1AQ16623 288 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 SLC45A4Q5BKX6 768 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 ANKRD40Q6AI12 368 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 CRELD2Q6UXH1 353 aaPredicted RBP17.63■□□□□ 0.41
NEK9-204ENST00000554258 SCAMP5Q8TAC9 235 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 GANCQ8TET4 914 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 NELFBQ8WX92 580 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 POMGNT1Q8WZA1 660 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 P2RY11Q96G91 374 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 ZNF518BQ9C0D4 1074 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 OSBPL2Q9H1P3 480 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 EBF2Q9HAK2 575 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 NCKAP1Q9Y2A7 1128 aa17.63■□□□□ 0.41
NEK9-204ENST00000554258 A0A1B0GVM2 712 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 CDRT15L2A8MXV6 281 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 WNT9AO14904 365 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 CLIC2O15247 247 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 LDHAP00338 332 aaKnown RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 PENKP01210 267 aaPredicted RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 DUSP3P51452 185 aaPredicted RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 SKIDA1Q1XH10 827 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 ISXQ2M1V0 245 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 FNDC3BQ53EP0 1204 aaKnown RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 FOXR1Q6PIV2 292 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 PTRH1Q86Y79 214 aaKnown RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 CXorf38Q8TB03 319 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 PIWIL1Q96J94 861 aaKnown RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 FAM84AQ96KN4 292 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 FBRSQ9HAH7 460 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
NEK9-204ENST00000554258 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
NEK9-204ENST00000554258 ZFC3H1O60293 1989 aaKnown RBP17.61■□□□□ 0.41
NEK9-204ENST00000554258 A0A1W2PNU3 283 aaPredicted RBP17.61■□□□□ 0.41
NEK9-204ENST00000554258 BICDL2A1A5D9 508 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 TBX18O95935 607 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 NR3C1P04150 777 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 ZDHHC11BP0C7U3 371 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 C7P10643 843 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 WARSP23381 471 aaKnown RBP17.61■□□□□ 0.41
NEK9-204ENST00000554258 WNT7BP56706 349 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 KLHL10Q6JEL2 608 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 NCEH1Q6PIU2 408 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 TMC6Q7Z403 805 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 ARL14Q8N4G2 192 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 XXYLT1Q8NBI6 393 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 ZSWIM2Q8NEG5 633 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 SERAC1Q96JX3 654 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 PHF12Q96QT6 1004 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 KIAA1586Q9HCI6 787 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 PCDHGA8Q9Y5G5 932 aa17.61■□□□□ 0.41
NEK9-204ENST00000554258 TRIM49BA6NDI0 452 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 CLDN5O00501 218 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 MAPK13O15264 365 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 TIMM44O43615 452 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 POU3F2P20265 443 aaPredicted RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 RPL13P26373 211 aaKnown RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 GALCP54803 685 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 ZNF445P59923 1031 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 FKBP3Q00688 224 aaKnown RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 FYB2Q5VWT5 728 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 C11orf57Q6ZUT1 292 aaPredicted RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 LIMS2Q7Z4I7 341 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 GPD1LQ8N335 351 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 RBBP8NLQ8NC74 664 aaPredicted RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 ZNF564Q8TBZ8 553 aaPredicted RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 ENOX1Q8TC92 643 aaKnown RBP17.6■□□□□ 0.41
NEK9-204ENST00000554258 ATXN7L3BQ96GX2 97 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 TSG101Q99816 390 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 BPIFA3Q9BQP9 254 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 PCIF1Q9H4Z3 704 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 SIX4Q9UIU6 781 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 CTNND2Q9UQB3 1225 aa17.6■□□□□ 0.41
NEK9-204ENST00000554258 LRRK1Q38SD2 2015 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 CKMT1AP12532 417 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 ATP5C1P36542 298 aaKnown RBP17.59■□□□□ 0.41
NEK9-204ENST00000554258 SLC5A3P53794 718 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms