RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CHST9Q7L1S5 443 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 NLRP14Q86W24 1093 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 JAMLQ86YT9 394 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 DENND1CQ8IV53 801 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 CDKL3Q8IVW4 592 aaPredicted RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 FAM217AQ8IXS0 508 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 UMODL1-AS1Q8N2C9 162 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ALLCQ8N6M5 410 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 EIF1ADQ8N9N8 165 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 ADAMTS19Q8TE59 1207 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 SEC14L1Q92503 715 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 RTP4Q96DX8 246 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TCEAL4Q96EI5 215 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 CCDC114Q96M63 670 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 RPRD1AQ96P16 312 aaPredicted RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 QKIQ96PU8 341 aaKnown RBP eCLIP7.88□□□□□ -1.15
TDP1-209ENST00000554180 CYP2S1Q96SQ9 504 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 FERMT1Q9BQL6 677 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 LRRC1Q9BTT6 524 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 FAM129AQ9BZQ8 928 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TTYH1Q9H313 450 aaPredicted RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 PRDM12Q9H4Q4 367 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ANKZF1Q9H8Y5 726 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TDP1Q9NUW8 608 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ETNK2Q9NVF9 386 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 TMEM248Q9NWD8 314 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 SMPD4Q9NXE4 827 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 GDE1Q9NZC3 331 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 DTLQ9NZJ0 730 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 AGO1Q9UL18 857 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 DNPEPQ9ULA0 475 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 VANGL2Q9ULK5 521 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 ZNF148Q9UQR1 794 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 COLQQ9Y215 455 aaPredicted RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 UTP11Q9Y3A2 253 aaKnown RBP7.88□□□□□ -1.15
TDP1-209ENST00000554180 SH3BP1Q9Y3L3 701 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 HEY1Q9Y5J3 304 aa7.88□□□□□ -1.15
TDP1-209ENST00000554180 PRRC2BQ5JSZ5 2229 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 A0A1B0GVM2 712 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 BCLAF3A2AJT9 711 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 TYW5A2RUC4 315 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 TCAF2A6NFQ2 919 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 BHMG1C9JSJ3 638 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 LEFTY2O00292 366 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 GFRA2O00451 464 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 NRG2O14511 850 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 NDC80O14777 642 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 TTI1O43156 1089 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 MTSS1O43312 755 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CLDN11O75508 207 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 HEXIM1O94992 359 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 RHOXF2BP0C7M4 288 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 IRF1P10914 325 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 GJA1P17302 382 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CEBPBP17676 345 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CHKAP35790 457 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 GGCXP38435 758 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 PTGIRP43119 386 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 NDST2P52849 883 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 DRG2P55039 364 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 CDH4P55283 916 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 RBM10P98175 930 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 GBE1Q04446 702 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 GALNT2Q10471 571 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 SNX1Q13596 522 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CUL1Q13616 776 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 PTK6Q13882 451 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 PRKD1Q15139 912 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 PPP1R7Q15435 360 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 ELF2Q15723 593 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 SLC45A4Q5BKX6 768 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 RARS2Q5T160 578 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 MPP7Q5T2T1 576 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 STXBP5Q5T5C0 1151 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 AFMIDQ63HM1 303 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 RAP1GAP2Q684P5 730 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 SYCE2Q6PIF2 218 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 C1orf228Q6PIY5 440 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 NPNTQ6UXI9 565 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 C14orf80Q86SX3 495 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 IFT20Q8IY31 132 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 CPXM2Q8N436 756 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 NPWQ8N729 165 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 C12orf76Q8N812 135 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 HJURPQ8NCD3 748 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 TFB1MQ8WVM0 346 aaKnown RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.87□□□□□ -1.158e-7■■■■■ 32.1
TDP1-209ENST00000554180 USP13Q92995 863 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 HDAC11Q96DB2 347 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 OTUB2Q96DC9 234 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 RHOXF2Q9BQY4 288 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 ERP44Q9BS26 406 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 KLC2Q9H0B6 622 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 ADAM7Q9H2U9 754 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 IGFLR1Q9H665 355 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 PCDH9Q9HC56 1237 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 GKN1Q9NS71 199 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 OBP2AQ9NY56 170 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms