RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 DRG1Q9Y295 367 aaKnown RBP10.78□□□□□ -0.68
TMEM55B-205ENST00000554028 SNX10Q9Y5X0 201 aa10.78□□□□□ -0.68
TMEM55B-205ENST00000554028 CFAP69A5D8W1 941 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM187AA6NFU0 413 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 DRGXA6NNA5 263 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 HACD1B0YJ81 288 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 I6L893 689 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 LIASO43766 372 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 STK10O94804 968 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 KLKB1P03952 638 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 RBP3P10745 1247 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 CEBPBP17676 345 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 MCM3P25205 808 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 WEE1P30291 646 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 HOXC13P31276 330 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 STIP1P31948 543 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ACTN2P35609 894 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 GGCXP38435 758 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 TERF1P54274 439 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 VCPP55072 806 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ADCY2Q08462 1091 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 PAFAH1B3Q15102 231 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 NOMO1Q15155 1222 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 PPP1R7Q15435 360 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 MANEALQ5VSG8 457 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 NCBP2-AS2Q69YL0 99 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 SYCE2Q6PIF2 218 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 LRRC49Q8IUZ0 686 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 CDKL3Q8IVW4 592 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ARID3BQ8IVW6 561 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 CELF5Q8N6W0 485 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 RTL3Q8N8U3 475 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 CCNYQ8ND76 341 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ITFG1Q8TB96 612 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ZSCAN18Q8TBC5 510 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 CCHCR1Q8TD31 782 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ATG4AQ8WYN0 398 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 TMA16Q96EY4 203 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM161BQ96MY7 647 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 NECTIN4Q96NY8 510 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 HERPUD2Q9BSE4 406 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 RAB17Q9H0T7 212 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 THG1LQ9NWX6 298 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 PCYOX1Q9UHG3 505 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 STOML2Q9UJZ1 356 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 R3HDM2Q9Y2K5 976 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
TMEM55B-205ENST00000554028 COL4A4P53420 1690 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 GOLGA6L7A0A1B0GV03 622 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 WASH4PA8MWX3 477 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SGK1O00141 431 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 DCLK1O15075 740 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SNPHO15079 494 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CLDN11O75508 207 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 ITGAVP06756 1048 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 RHOXF2BP0C7M4 288 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 TCF3P15923 654 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 OR1E1P30953 314 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 MAPKAPK2P49137 400 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CDH4P55283 916 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CBX2Q14781 532 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SIX1Q15475 284 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 MPPE1Q53F39 396 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 NADSYN1Q6IA69 706 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 NPNTQ6UXI9 565 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 GET4Q7L5D6 327 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 C14orf80Q86SX3 495 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 ZC3H18Q86VM9 953 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CPXM2Q8N436 756 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 GPR161Q8N6U8 529 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 KIAA1958Q8N8K9 716 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CCDC89Q8N998 374 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 NOA1Q8NC60 698 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 HJURPQ8NCD3 748 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 TFB1MQ8WVM0 346 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 FGF13Q92913 245 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SMARCD2Q92925 531 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 OTUB2Q96DC9 234 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 RHOXF2Q9BQY4 288 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 LRRC1Q9BTT6 524 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SMG9Q9H0W8 520 aaKnown RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 TMEM248Q9NWD8 314 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 MPP6Q9NZW5 540 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CLEC1BQ9P126 229 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 SAE1Q9UBE0 346 aaPredicted RBP10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 DNPEPQ9ULA0 475 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 CDH7Q9ULB5 785 aa10.76□□□□□ -0.69
TMEM55B-205ENST00000554028 ZFP37Q9Y6Q3 630 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms