RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 INHBCP55103 352 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 ZNF445P59923 1031 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 TLE1Q04724 770 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 BIRC3Q13489 604 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 STAT4Q14765 748 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
PRPF39-204ENST00000553605 RSRC2Q7L4I2 434 aaKnown RBP14.38□□□□□ -0.11
PRPF39-204ENST00000553605 AADATQ8N5Z0 425 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 EXTL1Q92935 676 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 PLD4Q96BZ4 506 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 GRAMD1AQ96CP6 724 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 CYFIP2Q96F07 1278 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 MYO19Q96H55 970 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 PRR11Q96HE9 360 aaPredicted RBP14.38□□□□□ -0.11
PRPF39-204ENST00000553605 WDR70Q9NW82 654 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 UCKL1Q9NWZ5 548 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 PCDHGA8Q9Y5G5 932 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 BSNQ9UPA5 3926 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 STX6O43752 255 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 LZTS3O60299 673 aaPredicted RBP14.37□□□□□ -0.11
PRPF39-204ENST00000553605 KIF20AO95235 890 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 P4HA1P13674 534 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
PRPF39-204ENST00000553605 CD70P32970 193 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 HARS2P49590 506 aaKnown RBP14.37□□□□□ -0.11
PRPF39-204ENST00000553605 DUSP3P51452 185 aaPredicted RBP14.37□□□□□ -0.11
PRPF39-204ENST00000553605 CYP2J2P51589 502 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 PPP2CBP62714 309 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 PPP2CAP67775 309 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 NCOA4Q13772 614 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 TRIP4Q15650 581 aaPredicted RBP14.37□□□□□ -0.11
PRPF39-204ENST00000553605 C9orf64Q5T6V5 341 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 USP53Q70EK8 1073 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 CCDC65Q8IXS2 484 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 ARL14Q8N4G2 192 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 MAPK15Q8TD08 544 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 HPS3Q969F9 1004 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 ATXN7L3BQ96GX2 97 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 APOLD1Q96LR9 279 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 SEMA3CQ99985 751 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 AGPAT3Q9NRZ7 376 aa14.37□□□□□ -0.11
PRPF39-204ENST00000553605 TARSL2A2RTX5 802 aaKnown RBP14.36□□□□□ -0.11
PRPF39-204ENST00000553605 H3BQV1 296 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 CLIC2O15247 247 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 GJB6O95452 261 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 ITGB2P05107 769 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 FAM87AP0C7U9 286 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 ALPPL2P10696 532 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 C5AR1P21730 350 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 MAT2AP31153 395 aaKnown RBP14.36□□□□□ -0.11
PRPF39-204ENST00000553605 PSMD8P48556 350 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 CASP4P49662 377 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 WFDC5Q8TCV5 224 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 SGF29Q96ES7 293 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 KLHDC7BQ96G42 594 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 FAM129BQ96TA1 746 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 EVA1BQ9NVM1 165 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 STOML2Q9UJZ1 356 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 ATXN7L1Q9ULK2 861 aaPredicted RBP14.36□□□□□ -0.11
PRPF39-204ENST00000553605 DMTF1Q9Y222 760 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 ENTPD2Q9Y5L3 495 aa14.36□□□□□ -0.11
PRPF39-204ENST00000553605 RELNP78509 3460 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 NBPF19A0A087WUL8 3843 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 TGM2P21980 687 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 NUDT1P36639 197 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 SGSHP51688 502 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 ARID5BQ14865 1188 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 SGSM1Q2NKQ1 1148 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 ADGRF1Q5T601 910 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.35□□□□□ -0.11
PRPF39-204ENST00000553605 CLEC14AQ86T13 490 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 IFI44Q8TCB0 444 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 MRGPRX3Q96LB0 322 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 DUSP16Q9BY84 665 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 USP29Q9HBJ7 922 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 KLHL11Q9NVR0 708 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 CYTH4Q9UIA0 394 aa14.35□□□□□ -0.11
PRPF39-204ENST00000553605 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 TTC34A8MYJ7 566 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 PRAMEF26H0Y7S4 382 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 TNFSF15O95150 251 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 VNN1O95497 513 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 ADH1BP00325 375 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
PRPF39-204ENST00000553605 ASLP04424 464 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-204ENST00000553605 THEGLP0DJG4 465 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 MLLT3P42568 568 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-204ENST00000553605 AP3M2P53677 418 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 YWHAGP61981 247 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF39-204ENST00000553605 KCNMA1Q12791 1236 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms