RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PDK1Q15118 436 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ELMSAN1Q6PJG2 1045 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ZDHHC24Q6UX98 284 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 LRRC31Q6UY01 552 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 RBM23Q86U06 439 aaKnown RBP18.11■□□□□ 0.49
PSEN1-206ENST00000553447 CHSY1Q86X52 802 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 CCDC33Q8N5R6 958 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ARL14EPQ8N8R7 260 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-206ENST00000553447 FAM71DQ8N9W8 422 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 AZIN2Q96A70 460 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 RTP4Q96DX8 246 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ZFRQ96KR1 1074 aaKnown RBP18.11■□□□□ 0.49
PSEN1-206ENST00000553447 CYP2S1Q96SQ9 504 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ATXN3LQ9H3M9 355 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 TLE6Q9H808 572 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 USP29Q9HBJ7 922 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ZDHHC18Q9NUE0 388 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 ZDHHC7Q9NXF8 308 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 MYO7AQ13402 2215 aa18.11■□□□□ 0.49
PSEN1-206ENST00000553447 NYNRINQ9P2P1 1898 aaKnown RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 PPP1R12AO14974 1030 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 KCNN4O15554 427 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 XYLBO75191 536 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 ITIH2P19823 946 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 CORO1AP31146 461 aaKnown RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 SLC11A2P49281 568 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 GALNT2Q10471 571 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 CALCOCO2Q13137 446 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 PRKD1Q15139 912 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 FBXL22Q6P050 247 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 EMBQ6PCB8 327 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 TP53INP2Q8IXH6 220 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 RTL3Q8N8U3 475 aaKnown RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 NETO2Q8NC67 525 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 BBOF1Q8ND07 529 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 TFB1MQ8WVM0 346 aaKnown RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 ART4Q93070 314 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 FAM129AQ9BZQ8 928 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 ZYG11BQ9C0D3 744 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 KLC2Q9H0B6 622 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 SMPD4Q9NXE4 827 aa18.1■□□□□ 0.49
PSEN1-206ENST00000553447 DNMT3BQ9UBC3 853 aaKnown RBP18.1■□□□□ 0.49
PSEN1-206ENST00000553447 TRAV19A0A0A6YYK7 116 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 GOLGA6L7A0A1B0GV03 622 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 DRGXA6NNA5 263 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 NRG2O14511 850 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-206ENST00000553447 NCAM2O15394 837 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 KLKB1P03952 638 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 IRF1P10914 325 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 VAV1P15498 845 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 RHOQP17081 205 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 GJA1P17302 382 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 MX2P20592 715 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 RPL22P35268 128 aaKnown RBP18.09■□□□□ 0.49
PSEN1-206ENST00000553447 CCR2P41597 374 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 NRIP1P48552 1158 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 PLTPP55058 493 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 SLC7A9P82251 487 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 GPS1Q13098 491 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 P3H1Q32P28 736 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 FAM133BQ5BKY9 247 aaKnown RBP18.09■□□□□ 0.49
PSEN1-206ENST00000553447 IZUMO3Q5VZ72 239 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 NLRP14Q86W24 1093 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 DENND1CQ8IV53 801 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 LZTR1Q8N653 840 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 MAB21L3Q8N8X9 362 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 LEMD2Q8NC56 503 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 SHKBP1Q8TBC3 707 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 CAVIN3Q969G5 261 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 IGSF8Q969P0 613 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 WBP2Q969T9 261 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 TIFAQ96CG3 184 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 LRRC45Q96CN5 670 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 PRKD2Q9BZL6 878 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 PRDM12Q9H4Q4 367 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 MPP6Q9NZW5 540 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 CPQQ9Y646 472 aa18.09■□□□□ 0.49
PSEN1-206ENST00000553447 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
PSEN1-206ENST00000553447 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 F5H5T6 163 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 DNALI1O14645 258 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-206ENST00000553447 MOSPD3O75425 235 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 ZNF189O75820 626 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-206ENST00000553447 LATS1O95835 1130 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 RHOP08100 348 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 FAM153BP0C7A2 387 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 DDX6P26196 483 aaKnown RBP eCLIP18.08■□□□□ 0.48
PSEN1-206ENST00000553447 SLC6A4P31645 630 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 IRAK1P51617 712 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 ITGA8P53708 1063 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 SMAD3P84022 425 aaKnown RBP18.08■□□□□ 0.48
PSEN1-206ENST00000553447 FAM153CQ494X1 144 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 C5orf22Q49AR2 442 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 ZNF697Q5TEC3 545 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 HEATR6Q6AI08 1181 aaKnown RBP18.08■□□□□ 0.48
PSEN1-206ENST00000553447 ARHGAP12Q8IWW6 846 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 FBXO25Q8TCJ0 367 aa18.08■□□□□ 0.48
PSEN1-206ENST00000553447 ADAMTS19Q8TE59 1207 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms