RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 INTS6Q9UL03 887 aaKnown RBP16.45■□□□□ 0.22
CDK4-215ENST00000553237 CEP83Q9Y592 693 aa16.45■□□□□ 0.22
CDK4-215ENST00000553237 LAMA1P25391 3075 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 MEI4A8MW99 385 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 KCNU1A8MYU2 1149 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 HSF2BPO75031 334 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 CYP11B1P15538 503 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 ABCB4P21439 1286 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 EEF1GP26641 437 aaKnown RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 OXTRP30559 389 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 PI4KAP42356 2102 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 ATXN3P54252 364 aaPredicted RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 SLC6A3Q01959 620 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 NME3Q13232 169 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 EIF4EBP2Q13542 120 aaPredicted RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 WDR45BQ5MNZ6 344 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 CIR1Q86X95 450 aaPredicted RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 TTC17Q96AE7 1141 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 NUP58Q9BVL2 599 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 CAPN10Q9HC96 672 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 PRSS16Q9NQE7 514 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 KIAA1522Q9P206 1035 aaPredicted RBP16.44■□□□□ 0.22
CDK4-215ENST00000553237 SUN2Q9UH99 717 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 CEP192Q8TEP8 1941 aa16.44■□□□□ 0.22
CDK4-215ENST00000553237 F5H5T6 163 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 SLC2A3P11169 496 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 UCHL3P15374 230 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 CCR1P32246 355 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 CTSOP43234 321 aaPredicted RBP16.43■□□□□ 0.22
CDK4-215ENST00000553237 KLK7P49862 253 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 SNX16P57768 344 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 RNASE9P60153 205 aaKnown RBP16.43■□□□□ 0.22
CDK4-215ENST00000553237 ST8SIA6P61647 398 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 RPS14P62263 151 aaKnown RBP16.43■□□□□ 0.22
CDK4-215ENST00000553237 PITRM1Q5JRX3 1037 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 SMYD5Q6GMV2 418 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 RABEPKQ7Z6M1 372 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 APCDD1Q8J025 514 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 TMEM35BQ8NCS4 154 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 OR2I1PQ8NGU4 316 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 MYO19Q96H55 970 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 CNTNAP3BQ96NU0 1288 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 PRMT1Q99873 361 aaKnown RBP16.43■□□□□ 0.22
CDK4-215ENST00000553237 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
CDK4-215ENST00000553237 CNTNAP3Q9BZ76 1288 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 MIR1-1HGQ9H1L0 117 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 CKAP5Q14008 2032 aa16.43■□□□□ 0.22
CDK4-215ENST00000553237 METTL12A8MUP2 240 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 M0QYT0 321 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 DAB1O75553 588 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 IGLV3-19P01714 112 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 ASLP04424 464 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 GNSP15586 552 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 NOS2P35228 1153 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 GGCXP38435 758 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 KRT31Q15323 416 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 PLEKHG6Q3KR16 790 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 DCAF12L1Q5VU92 463 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 SLC26A9Q7LBE3 791 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 NOP9Q86U38 636 aaKnown RBP16.42■□□□□ 0.22
CDK4-215ENST00000553237 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
CDK4-215ENST00000553237 DEFB124Q8NES8 71 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 CADM4Q8NFZ8 388 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 STK33Q9BYT3 514 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 FANCLQ9NW38 375 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 ERVW-1Q9UQF0 538 aa16.42■□□□□ 0.22
CDK4-215ENST00000553237 TTC34A8MYJ7 566 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 SIN3BO75182 1162 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 MOCS3O95396 460 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 DNTTP04053 509 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 PDGFRAP16234 1089 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 ACSL1P33121 698 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 STX1AQ16623 288 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 C2CD6Q53TS8 623 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 CDKAL1Q5VV42 579 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 FBXL22Q6P050 247 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 ZCCHC9Q8N567 271 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 MINDY1Q8N5J2 469 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 DNASE2BQ8WZ79 361 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 IGSF8Q969P0 613 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 C18orf8Q96DM3 657 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 RPL10LQ96L21 214 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 SIK2Q9H0K1 926 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDK4-215ENST00000553237 SUSD2Q9UGT4 822 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 EIF2B4Q9UI10 523 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 SLCO3A1Q9UIG8 710 aa16.41■□□□□ 0.22
CDK4-215ENST00000553237 TPRP12270 2363 aaKnown RBP16.41■□□□□ 0.22
CDK4-215ENST00000553237 ASCC3Q8N3C0 2202 aaKnown RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 F8VZ95 297 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 SYPP08247 313 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms