RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SLC16A3O15427 465 aaKnown RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 IRAK2O43187 625 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 RRP9O43818 475 aaKnown RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 DFNA5O60443 496 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 GADD45BO75293 160 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 DLDP09622 509 aaKnown RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 ABCB4P21439 1286 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 NNMTP40261 264 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 GRK6P43250 576 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 COPAP53621 1224 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 ACAP1Q15027 740 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 STILQ15468 1287 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 TRIP4Q15650 581 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 CCDC40Q4G0X9 1142 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 RAB41Q5JT25 222 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 PM20D1Q6GTS8 502 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 C19orf48Q6RUI8 117 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 TMEM270Q6UE05 265 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 SMYD4Q8IYR2 804 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 ZNF366Q8N895 744 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 HJURPQ8NCD3 748 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 SEMA4DQ92854 862 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 NT5C1BQ96P26 610 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 OMDQ99983 421 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 ACE2Q9BYF1 805 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 IL21RQ9HBE5 538 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 CD248Q9HCU0 757 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 AASDHPPTQ9NRN7 309 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 FTSJ1Q9UET6 329 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 SCML1Q9UN30 329 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 ANKRD6Q9Y2G4 727 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 FNDC3AQ9Y2H6 1198 aaKnown RBP9.04□□□□□ -0.96
TMEM116-217ENST00000552801 FAM208BQ5VWN6 2430 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 CKAP5Q14008 2032 aa9.04□□□□□ -0.96
TMEM116-217ENST00000552801 FAM221BA6H8Z2 402 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 LRRC72A6NJI9 287 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 M0QYV0 167 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 PSMA7O14818 248 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 SART1O43290 800 aaKnown RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 GJB3O75712 270 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 FBXO21O94952 628 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 IGLV3-19P01714 112 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 APOEP02649 317 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 ASLP04424 464 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 CD27P26842 260 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 HLA-FP30511 346 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 GRIA4P48058 902 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 RGS7P49802 495 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 TBX4P57082 545 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 ENPP2Q13822 863 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 KIF19Q2TAC6 998 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 CCNI2Q6ZMN8 369 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 RETREG3Q86VR2 466 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 PPM1KQ8N3J5 372 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 IRGQQ8WZA9 623 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 NDRG1Q92597 394 aaKnown RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 SMARCE1Q969G3 411 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 IGSF8Q969P0 613 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 FAM149B1Q96BN6 582 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 C6orf106Q9H6K1 298 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 ST7Q9NRC1 585 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 KIAA1522Q9P206 1035 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 SLC12A6Q9UHW9 1150 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 CLEC4EQ9ULY5 219 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-217ENST00000552801 SNX11Q9Y5W9 270 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
TMEM116-217ENST00000552801 YJEFN3A6XGL0 299 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 E7ENQ6 273 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 PIK3R2O00459 728 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 TNFSF14O43557 240 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 ACSL4O60488 711 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 RNASEH2AO75792 299 aaKnown RBP9.02□□□□□ -0.97
TMEM116-217ENST00000552801 LTFP02788 710 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 ITGAVP06756 1048 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 PAEPP09466 180 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 ACSL1P33121 698 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 HNF1BP35680 557 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 RPS14P62263 151 aaKnown RBP9.02□□□□□ -0.97
TMEM116-217ENST00000552801 LRRC63Q05C16 580 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 PNOCQ13519 176 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 MPP7Q5T2T1 576 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 ZNF658Q5TYW1 1059 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-217ENST00000552801 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 FAM217AQ8IXS0 508 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 MDM1Q8TC05 714 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 KCTD13Q8WZ19 329 aa9.02□□□□□ -0.97
TMEM116-217ENST00000552801 BIRC7Q96CA5 298 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms