RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CHRM1P11229 460 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 HNRNPLP14866 589 aaKnown RBP eCLIP19.08■□□□□ 0.645e-8■■■■■ 61.7
PRPF40B-216ENST00000552301 POLR2EP19388 210 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 DMWDQ09019 674 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 STARD3Q14849 445 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 RNF43Q68DV7 783 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 WDR5BQ86VZ2 330 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 OR8K1Q8NGG5 319 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 WFDC5Q8TCV5 224 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 ANP32EQ9BTT0 268 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 RBSNQ9H1K0 784 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 DEF6Q9H4E7 631 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 KIAA1522Q9P206 1035 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 CNOT8Q9UFF9 292 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 RAB23Q9ULC3 237 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 SCINQ9Y6U3 715 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 TCRBV5S1A1TA0A578 114 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 TCRBV21S2A2A0A5A6 115 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 PROB1E7EW31 1015 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 ADAM23O75077 832 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 ENDOD1O94919 500 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 PLEKP08567 350 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 CD70P32970 193 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 CNR2P34972 360 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 ZNF143P52747 638 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 OXCT1P55809 520 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 RPL7AP62424 266 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 LMAN2Q12907 356 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 MBLAC2Q68D91 279 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 SERPINA13PQ6UXR4 307 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 TMEM92Q6UXU6 159 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 TMC6Q7Z403 805 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 BNIPLQ7Z465 357 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 CIR1Q86X95 450 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 CCAR2Q8N163 923 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 PGBD3Q8N328 593 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 HAPLN3Q96S86 360 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 ACOX2Q99424 681 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 CNPY3Q9BT09 278 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 THAP10Q9P2Z0 257 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 PLA2G4CQ9UP65 541 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 STON1Q9Y6Q2 735 aa19.07■□□□□ 0.64
PRPF40B-216ENST00000552301 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 CCP110O43303 1012 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 LILRB5O75023 590 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 MFAP3LO75121 409 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 LMNAP02545 664 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 HNRNPH3P31942 346 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 ZNF177Q13360 481 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 MAMLD1Q13495 774 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 FNDC3BQ53EP0 1204 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 PLEKHA7Q6IQ23 1121 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 PRR23BQ6ZRT6 265 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 CEP68Q76N32 757 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 DNAAF5Q86Y56 855 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 CNGA4Q8IV77 575 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 DRC7Q8IY82 874 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 HMGB4Q8WW32 186 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 SORCS1Q8WY21 1168 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 PPP1R9BQ96SB3 815 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 DNAJC7Q99615 494 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 GABRG3Q99928 467 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 MRPL47Q9HD33 250 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 ARHGAP20Q9P2F6 1191 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 MYO1AQ9UBC5 1043 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 HCN2Q9UL51 889 aa19.06■□□□□ 0.64
PRPF40B-216ENST00000552301 SYNCRIPO60506 623 aaKnown RBP19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 CLDN11O75508 207 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ASLP04424 464 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 PSMA2P25787 234 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 HOXC13P31276 330 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 CDH4P55283 916 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 HDAC4P56524 1084 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ZNF234Q14588 700 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 FUT11Q495W5 492 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 PPP1R15BQ5SWA1 713 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 SH3PXD2AQ5TCZ1 1133 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 TMEM215Q68D42 235 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 SCYL2Q6P3W7 929 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 C14orf80Q86SX3 495 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ADIPOR2Q86V24 386 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 CYB5D2Q8WUJ1 264 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 CENPIQ92674 756 aaPredicted RBP19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 IGSF8Q969P0 613 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 C1orf74Q96LT6 269 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ISCUQ9H1K1 167 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ANLNQ9NQW6 1124 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 TMPRSS4Q9NRS4 437 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 ABHD10Q9NUJ1 306 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 SNX10Q9Y5X0 201 aa19.05■□□□□ 0.64
PRPF40B-216ENST00000552301 PIEZO1Q92508 2521 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 A0A087X0T9 212 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 E9PAM4 449 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 GFRA3O60609 400 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 SRGAP2O75044 1071 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 RPP40O75818 363 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 DLDP09622 509 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 FAM228BP0C875 321 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 ADRA1BP35368 520 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms