RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ZNF252P-AS1Q0IIN9 211 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 PRPSAP1Q14558 356 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 POU6F1Q14863 301 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 FAM153CQ494X1 144 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 C11orf63Q6NUN7 778 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 FAM124AQ86V42 546 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 MRPL43Q8N983 215 aaKnown RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 PCDH19Q8TAB3 1148 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CXorf38Q8TB03 319 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ITFG1Q8TB96 612 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CASKIN2Q8WXE0 1202 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 TBC1D31Q96DN5 1066 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 RNF157Q96PX1 679 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 KLC2Q9H0B6 622 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ZNF334Q9HCZ1 680 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 FAM153AQ9UHL3 310 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 IPO11Q9UI26 975 aaKnown RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 A0A0A6YYK5 440 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 A0A0U1RQS6 177 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ERICH4A6NGS2 130 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 RNF103O00237 685 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 PPP1R12AO14974 1030 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 SNAP91O60641 907 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 GKP32189 559 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CHRNA3P32297 505 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 SERPINB6P35237 376 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 OXCT1P55809 520 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 ALFQ53S48 1182 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 SCD5Q86SK9 330 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 PDIK1LQ8N165 341 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 PPM1NQ8N819 430 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 SPATA22Q8NHS9 363 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 EXT2Q93063 718 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 DDX23Q9BUQ8 820 aaKnown RBP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 VN1R3Q9BXE9 311 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 MTG2Q9H4K7 406 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 BRD9Q9H8M2 597 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHPT1-208ENST00000552215 SSX2IPQ9Y2D8 614 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 DAB1O75553 588 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 MCM3P25205 808 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CCDC13Q8IYE1 715 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CYB5D2Q8WUJ1 264 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 HES6Q96HZ4 224 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CCL26Q9Y258 94 aa8.4□□□□□ -1.06
CHPT1-208ENST00000552215 CUL9Q8IWT3 2517 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 E9PAM4 449 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 AXIN1O15169 862 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 SLC2A3P11169 496 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 ACVRL1P37023 503 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 GDF10P55107 478 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 DPYSL3Q14195 570 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 PDK1Q15118 436 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 TMED2Q15363 201 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 FBXL22Q6P050 247 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 ANKS1BQ7Z6G8 1248 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 BBS7Q8IWZ6 715 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 ASIC4Q96FT7 647 aa8.4□□□□□ -1.07
CHPT1-208ENST00000552215 RBM15Q96T37 977 aaKnown RBP eCLIP8.4□□□□□ -1.07
CHPT1-208ENST00000552215 GVINP1Q7Z2Y8 2422 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 A0A0D9SEW6 157 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CCDC188H7C350 402 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 KPNA3O00505 521 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ZBTB24O43167 697 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 IRAK1P51617 712 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 RHOAP61586 193 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ST8SIA6P61647 398 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ZDHHC17Q8IUH5 632 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TRIM62Q9BVG3 475 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 DCLK3Q9C098 648 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 UXTQ9UBK9 157 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 FBXL21Q9UKT6 434 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 NCANO14594 1321 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PARP14Q460N5 1801 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 KCNU1A8MYU2 1149 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 MT-CYBP00156 380 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ASGR2P07307 311 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 MYBL2P10244 700 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CTPS1P17812 591 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PSMB4P28070 264 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 DSG1Q02413 1049 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TTC27Q6P3X3 843 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 TDHQ8IZJ6 230 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PSMG2Q969U7 264 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 THOC1Q96FV9 657 aaKnown RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CCDC77Q9BR77 488 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 CINPQ9BW66 212 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 IQCGQ9H095 443 aaKnown RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 ARHGEF4Q9NR80 690 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 PLA2G4CQ9UP65 541 aa8.39□□□□□ -1.07
CHPT1-208ENST00000552215 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-208ENST00000552215 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms