RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 CDRT15L2A8MXV6 281 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 RNASEH1O60930 286 aaKnown RBP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 CLSTN1O94985 981 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 C4BPAP04003 597 aaKnown RBP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 GOT1P17174 413 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 DGKAP23743 735 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 RBMS1P29558 406 aaKnown RBP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 CLN3Q13286 438 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 BIRC3Q13489 604 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 STXBP4Q6ZWJ1 553 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-221ENST00000552022 IQCHQ86VS3 1027 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 TTC17Q96AE7 1141 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 PLD4Q96BZ4 506 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 LMLNQ96KR4 655 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 MRGPRX3Q96LB0 322 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 FAM129BQ96TA1 746 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 U3KQA8 63 aa13.22□□□□□ -0.29
CACNB3-221ENST00000552022 USP9YO00507 2555 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 A0A087X0B3 334 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 H3BQV1 296 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 FFAR2O15552 330 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 GP1BAP07359 652 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 ASPAP45381 313 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 OVGP1Q12889 678 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 XKR5Q6UX68 686 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 APOLD1Q96LR9 279 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 CCNL2Q96S94 520 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 ABCG4Q9H172 646 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
CACNB3-221ENST00000552022 CA5BQ9Y2D0 317 aa13.21□□□□□ -0.29
CACNB3-221ENST00000552022 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 LRRIQ3A6PVS8 624 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 TTC34A8MYJ7 566 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 STX6O43752 255 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 KIF20AO95235 890 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 TGM2P21980 687 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 PSMD8P48556 350 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 YWHAGP61981 247 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 CLDN10P78369 228 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 STAT4Q14765 748 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 SGSM1Q2NKQ1 1148 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 EXTL1Q92935 676 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
CACNB3-221ENST00000552022 PCDHGA8Q9Y5G5 932 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 ENTPD2Q9Y5L3 495 aa13.2□□□□□ -0.3
CACNB3-221ENST00000552022 TARSL2A2RTX5 802 aaKnown RBP13.19□□□□□ -0.3
CACNB3-221ENST00000552022 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
CACNB3-221ENST00000552022 P4HA1P13674 534 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 CR2P20023 1033 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 C5AR1P21730 350 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 DRD3P35462 400 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 CSKP41240 450 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 AP3M2P53677 418 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 ZNF445P59923 1031 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 TLE1Q04724 770 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 INCA1Q0VD86 236 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 HS1BP3Q53T59 392 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-221ENST00000552022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-221ENST00000552022 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 STK40Q8N2I9 435 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 MAPK15Q8TD08 544 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 KLHDC7BQ96G42 594 aa13.19□□□□□ -0.3
CACNB3-221ENST00000552022 SEMA3CQ99985 751 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms