RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
RAB5C-208ENST00000551338 BCL7CQ8WUZ0 217 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-208ENST00000551338 RNF34Q969K3 372 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 SCLYQ96I15 445 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 MAGEB18Q96M61 343 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 SMC6Q96SB8 1091 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 TRIM56Q9BRZ2 755 aaKnown RBP11.83□□□□□ -0.52
RAB5C-208ENST00000551338 TMEM175Q9BSA9 504 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 BRD8Q9H0E9 1235 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 IL37Q9NZH6 218 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 KLHL8Q9P2G9 620 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-208ENST00000551338 OR12D3Q9UGF7 316 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 NUDT5Q9UKK9 219 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 LRFN2Q9ULH4 789 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 FAM159BA6NKW6 160 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CXorf49A8MYA2 514 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 TCP11X1B4DZS4 312 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 HOXA2O43364 376 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 TBC1D4O60343 1298 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 OAS1P00973 400 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CXCL10P02778 98 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 GALTP07902 379 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 VIMP08670 466 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CSH1P0DML2 217 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CSH2P0DML3 217 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CD68P34810 354 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 GARSP41250 739 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 SLC1A5Q15758 541 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 DDR2Q16832 855 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 TRMT10BQ6PF06 316 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 RSPO2Q6UXX9 243 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 MICALCLQ6ZW33 695 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 PIGWQ7Z7B1 504 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CEP57Q86XR8 500 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 ARHGAP12Q8IWW6 846 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 GSDMBQ8TAX9 411 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 SLC39A13Q96H72 371 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 SERPINB11Q96P15 392 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 FERMT1Q9BQL6 677 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 MRPL9Q9BYD2 267 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 NSRP1Q9H0G5 558 aaKnown RBP11.82□□□□□ -0.52
RAB5C-208ENST00000551338 GBA3Q9H227 469 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 GMIPQ9P107 970 aa11.82□□□□□ -0.52
RAB5C-208ENST00000551338 IQANK1A0A1B0GTG1 560 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 FAM92AA1XBS5 289 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 TBKBP1A7MCY6 615 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 KCNU1A8MYU2 1149 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 NT5C1B-RDH14C9J2C7 533 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 TRDMT1O14717 391 aaKnown RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MTSS1O43312 755 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 UGT1A9O60656 530 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 FAM155BO75949 473 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MYCP01106 439 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 INHBAP08476 426 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CCL5P13501 91 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CPB1P15086 417 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 TAC1P20366 129 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MX2P20592 715 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CA4P22748 312 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MGAT1P26572 445 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CCR1P32246 355 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 HTR7P34969 479 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CORO7P57737 925 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SARNPP82979 210 aaKnown RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SLC18A2Q05940 514 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 GKAP1Q5VSY0 366 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 C14orf80Q86SX3 495 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 TAX1BP1Q86VP1 789 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MON1AQ86VX9 555 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SLC26A11Q86WA9 606 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 PPM1NQ8N819 430 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 BANPQ8N9N5 519 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 ATAD1Q8NBU5 361 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CCDC197Q8NCU1 140 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 ZSCAN18Q8TBC5 510 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SPPL2BQ8TCT7 592 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 STAMBPL1Q96FJ0 436 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CELF6Q96J87 481 aaKnown RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 FCRL2Q96LA5 508 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms