RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 P2RX3P56373 397 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SOX4Q06945 474 aaPredicted RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TMED2Q15363 201 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 NPTX1Q15818 432 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 NFIL3Q16649 462 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ABCB5Q2M3G0 1257 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TIGD2Q4W5G0 525 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TEX44Q53QW1 395 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ITPRIPL1Q6GPH6 555 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CTRB2Q6GPI1 263 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ZFP1Q6P2D0 407 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 FDX2Q6P4F2 183 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 PAOXQ6QHF9 649 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 MAMDC4Q6UXC1 1216 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 C4orf22Q6V702 233 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF354CQ86Y25 554 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 DNAAF5Q86Y56 855 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC38A6Q8IZM9 456 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 UBL4BQ8N7F7 174 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 POU5F2Q8N7G0 328 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 FLAD1Q8NFF5 587 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 RAB3IL1Q8TBN0 382 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 PYDC1Q8WXC3 89 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 RAD54LQ92698 747 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF486Q96H40 463 aaPredicted RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TXNDC15Q96J42 360 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF512Q96ME7 567 aaPredicted RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TMEM74Q96NL1 305 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 GCNAQ96QF7 691 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 RBM15Q96T37 977 aaKnown RBP eCLIP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 RMDN3Q96TC7 470 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CYTH2Q99418 400 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 GDF15Q99988 308 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 LBHD1Q9BQE6 289 aaPredicted RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 FERMT1Q9BQL6 677 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 MXD3Q9BW11 206 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 TSSK1BQ9BXA7 367 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CEP41Q9BYV8 373 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC13A1Q9BZW2 595 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CLPBQ9H078 707 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 PDZD7Q9H5P4 517 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 STN1Q9H668 368 aaKnown RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 RPAP3Q9H6T3 665 aaPredicted RBP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 NANOGQ9H9S0 305 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC38A10Q9HBR0 1119 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CYP4F12Q9HCS2 524 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 KCNQ5Q9NR82 932 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 MKS1Q9NXB0 559 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CRIM1Q9NZV1 1036 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SIRPGQ9P1W8 387 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 VPS51Q9UID3 782 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 ANAPC5Q9UJX4 755 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC8A2Q9UPR5 921 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 SATB2Q9UPW6 733 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 PCDHB4Q9Y5E5 795 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 KIF13BQ9NQT8 1826 aa5.45□□□□□ -1.54
LSM3P2-201ENST00000551246 CHD4Q14839 1912 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 C5P01031 1676 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 KIF13AQ9H1H9 1805 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 MYOCOSA0A1B0GUC4 107 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 FAM237BA0A1B0GVD1 139 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 C7orf72A4D263 438 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 FAM172BPA6NC97 362 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 OR5K3A6NET4 321 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 CCDC160A6NGH7 325 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 H3BMQ9 156 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 ENPP3O14638 875 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 NUAK1O60285 661 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 CRYZL1O95825 349 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 IGHA1P01876 353 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 CYP1A2P05177 515 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 OR52Z1P0C646 297 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 ATP6V1B1P15313 513 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 RPL17P18621 184 aaKnown RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 ITGAXP20702 1163 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 CD247P20963 164 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 CA4P22748 312 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 JAK1P23458 1154 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 TBXAS1P24557 533 aaPredicted RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 RPA1P27694 616 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 NMT1P30419 496 aaKnown RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 ADSLP30566 484 aaPredicted RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 NUDT1P36639 197 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 STAT1P42224 750 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 KCNJ1P48048 391 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 KRT6CP48668 564 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 NT5C2P49902 561 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 PEX3P56589 373 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 B2MP61769 119 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 BASP1P80723 227 aaKnown RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 KRT17Q04695 432 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 RING1Q06587 406 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 DPYSQ14117 519 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 BMT2Q1RMZ1 405 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 RSPO4Q2I0M5 234 aaPredicted RBP5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC35G1Q2M3R5 365 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 SGO2Q562F6 1265 aa5.44□□□□□ -1.54
LSM3P2-201ENST00000551246 C6orf10Q5SRN2 563 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms