RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 LINC00271P0C7V0 271 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 HMGA1P17096 107 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 PTPN3P26045 913 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 GARSP41250 739 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 MAGEA6P43360 314 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 PPIDQ08752 370 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 KDM7AQ6ZMT4 941 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 ARHGAP12Q8IWW6 846 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 MRRFQ96E11 262 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 TRIM56Q9BRZ2 755 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 PIH1D1Q9NWS0 290 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 SPATA31D3P0C874 917 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 PSMB4P28070 264 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 HOXC13P31276 330 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 GUCY1A3Q02108 690 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 ZBTB17Q13105 803 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 EFTUD2Q15029 972 aaKnown RBP eCLIP20.24■□□□□ 0.834e-6■■■■□ 25.8
SSH1-209ENST00000551165 MS4A13Q5J8X5 152 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 SPATA31D4Q6ZUB0 917 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 UBE2Q1Q7Z7E8 422 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 DDX53Q86TM3 631 aaKnown RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 MYEOVQ96EZ4 313 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 ROPN1BQ9BZX4 212 aaPredicted RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 ROPN1Q9HAT0 212 aaPredicted RBP20.24■□□□□ 0.83
SSH1-209ENST00000551165 CREB1P16220 341 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 TUFMP49411 452 aaKnown RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 OLIG2Q13516 323 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 SEMA5AQ13591 1074 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 TNFAIP8L3Q5GJ75 292 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 CEP128Q6ZU80 1094 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 ZNF683Q8IZ20 524 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 TBC1D31Q96DN5 1066 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 GORASP1Q9BQQ3 440 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 TEX264Q9Y6I9 313 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 A0A087WUV0 522 aaPredicted RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 DFFAO00273 331 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 GJB5O95377 273 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 ABHD2P08910 425 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 KCNQ1P51787 676 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 SKOR1P84550 965 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 TRIP4Q15650 581 aaPredicted RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 C3orf62Q6ZUJ4 267 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 PDZD4Q76G19 769 aaPredicted RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 PID1Q7Z2X4 250 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 MPP5Q8N3R9 675 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 PDCD7Q8N8D1 485 aaKnown RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 ZNF512Q96ME7 567 aaPredicted RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 TTC25Q96NG3 672 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 UBE2OQ9C0C9 1292 aaKnown RBP20.23■□□□□ 0.83
SSH1-209ENST00000551165 SLC39A8Q9C0K1 460 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 YIPF1Q9Y548 306 aa20.23■□□□□ 0.83
SSH1-209ENST00000551165 ALPK3Q96L96 1907 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 EFCAB14O75071 495 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 CNTN5O94779 1100 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 BAIAP3O94812 1187 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 CSPG5O95196 566 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 URODP06132 367 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 PSEN1P49768 467 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 ZNF135P52742 658 aaPredicted RBP20.22■□□□□ 0.83
SSH1-209ENST00000551165 ZSCAN18Q8TBC5 510 aaPredicted RBP20.22■□□□□ 0.83
SSH1-209ENST00000551165 DPF3Q92784 378 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 HDAC11Q96DB2 347 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 AGAP3Q96P47 875 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 PLAC1Q9HBJ0 212 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 E7EVH7 732 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 POC1B-GALNT4F8VUJ3 575 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 SMAPO00193 183 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 ZBTB24O43167 697 aaPredicted RBP20.22■□□□□ 0.83
SSH1-209ENST00000551165 SERPINB6P35237 376 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 ALFQ53S48 1182 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 RAP1GAP2Q684P5 730 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 TFAP2DQ7Z6R9 452 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 MDM1Q8TC05 714 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 ZNF419Q96HQ0 510 aaPredicted RBP20.22■□□□□ 0.83
SSH1-209ENST00000551165 RABGEF1Q9UJ41 708 aa20.22■□□□□ 0.83
SSH1-209ENST00000551165 CHD7Q9P2D1 2997 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 EXOC1LA0A1B0GW35 172 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 ZNF840PA6NDX5 716 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 EIF3HO15372 352 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSH1-209ENST00000551165 TEX28O15482 410 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 OPHN1O60890 802 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 TCEA3O75764 348 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 FGF18O76093 207 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 IGLV3-27P01718 113 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 CD68P34810 354 aaPredicted RBP20.21■□□□□ 0.83
SSH1-209ENST00000551165 SPARCL1Q14515 664 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 STAT4Q14765 748 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 EMC10Q5UCC4 262 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 EXOC3L1Q86VI1 746 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSH1-209ENST00000551165 IGSF8Q969P0 613 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 C1orf74Q96LT6 269 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 CAPS2Q9BXY5 557 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 COMMD8Q9NX08 183 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 PSD3Q9NYI0 1048 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 EURLQ9NYK6 297 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 KLHL8Q9P2G9 620 aaPredicted RBP20.21■□□□□ 0.83
SSH1-209ENST00000551165 RAD54BQ9Y620 910 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms