RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 PTPN4P29074 926 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 DEFB128Q7Z7B8 93 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 CATSPER2Q96P56 530 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 TBCBQ99426 244 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 XYLBO75191 536 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 RIPOR1Q6ZS17 1223 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 ZFRQ96KR1 1074 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 RAD21L1Q9H4I0 556 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 IGSF6O95976 241 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 ANXA6P08133 673 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF7P17097 686 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 MAPK9P45984 424 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 BOP1Q14137 746 aaKnown RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 LY6KQ17RY6 165 aa12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
RAB3IP-212ENST00000550536 NDST1P52848 882 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 IL5RAQ01344 420 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 GRIK3Q13003 919 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 GNA13Q14344 377 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 DGKKQ5KSL6 1271 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM171A1Q5VUB5 890 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SCUBE3Q8IX30 993 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MCOLN3Q8TDD5 553 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SMNDC1O75940 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 TBCELQ5QJ74 424 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 USP45Q70EL2 814 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 STK40Q8N2I9 435 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SLC16A10Q8TF71 515 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 USP7Q93009 1102 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 ASB2Q96Q27 587 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 UGT2B28Q9BY64 529 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MID1IP1Q9NPA3 183 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 NINQ8N4C6 2090 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 CCDC130P13994 396 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 HNRNPH1P31943 449 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 CSNK2BP67870 215 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF470Q6ECI4 717 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 INTS5Q6P9B9 1019 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 BBS4Q96RK4 519 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FDXACB1Q9BRP7 624 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 RHBDL2Q9NX52 303 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PIK3CGP48736 1102 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 BNIPLQ7Z465 357 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SYT15Q9BQS2 421 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 DPY30Q9C005 99 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 TMCO1Q9UM00 188 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 TBKBP1A7MCY6 615 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM25AB3EWG3 89 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM25CB3EWG5 89 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM25GB3EWG6 89 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 INPP4BO15327 924 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PAICSP22234 425 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SVOPQ8N4V2 548 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 EMC1Q8N766 993 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PROX1Q92786 737 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 C6orf62Q9GZU0 229 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 TAF6LQ9Y6J9 622 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SERPINE1P05121 402 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PIK3R1P27986 724 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 OAZ1P54368 228 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 LPCAT1Q8NF37 534 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 PANX3Q96QZ0 392 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 RTFDC1Q9BY42 306 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 NDUFAF1Q9Y375 327 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SHROOM3Q8TF72 1996 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM20BO75063 409 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 POMCP01189 267 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 ACAP1Q15027 740 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 SYTL1Q8IYJ3 562 aa12.75□□□□□ -0.37
RAB3IP-212ENST00000550536 H3BN98 237 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ATG7O95352 703 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 PAEPP09466 180 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 CD248Q9HCU0 757 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 DUSP12Q9UNI6 340 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 CYP7B1O75881 506 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 FRG1Q14331 258 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms