RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PLSCR4Q9NRQ2 329 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 NOL7Q9UMY1 257 aaKnown RBP6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 HTTP42858 3142 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 POLR2AP24928 1970 aaKnown RBP6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 CCDC78A2IDD5 438 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 E7ENX8 843 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 F9P00740 461 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 RBL1P28749 1068 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 TAP2Q03519 686 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 PRICKLE4Q2TBC4 344 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 NAA35Q5VZE5 725 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 USP50Q70EL3 339 aaPredicted RBP6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 ZNF34Q8IZ26 560 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 ST8SIA2Q92186 375 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 NEU1Q99519 415 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 DPYSL5Q9BPU6 564 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 PHF7Q9BWX1 381 aaPredicted RBP6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 USP44Q9H0E7 712 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 C12orf65Q9H3J6 166 aaKnown RBP6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 PLEKHA2Q9HB19 425 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 FAM53CQ9NYF3 392 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 VPS28Q9UK41 221 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 NAALADL1Q9UQQ1 740 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 MAP3K15Q6ZN16 1313 aa6.73□□□□□ -1.33
TGFBR1-208ENST00000550253 LOC105369274A0A096LPK9 316 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 LOC102723532A0A0G2JNH3 316 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 A0A1B0GTL3 188 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 GXYLT2A0PJZ3 443 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 FFAR3O14843 346 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 B4GALT4O60513 344 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 CELF2O95319 508 aaKnown RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 AKR1B1P15121 316 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ITGALP20701 1170 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 GMPSP49915 693 aaPredicted RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ARF3P61204 181 aaPredicted RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ARF1P84077 181 aaKnown RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 MC2RQ01718 297 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 CXCL9Q07325 125 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 E2F2Q14209 437 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SSPNQ14714 243 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ACOX1Q15067 660 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SPECC1Q5M775 1068 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 C1QTNF12Q5T7M4 302 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ARHGAP40Q5TG30 622 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 RGS7BPQ6MZT1 257 aaPredicted RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 PIK3AP1Q6ZUJ8 805 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ZNF761Q86XN6 746 aaPredicted RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 OR4N4Q8N0Y3 316 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 Q8NA96 180 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 LINS1Q8NG48 757 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SLC22A17Q8WUG5 538 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 TMLHEQ9NVH6 421 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 HAUS2Q9NVX0 235 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 PLA2G3Q9NZ20 509 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 OAZ3Q9UMX2 235 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SSX2IPQ9Y2D8 614 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SLC27A6Q9Y2P4 619 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 OAS3Q9Y6K5 1087 aaKnown RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 IBTKQ9P2D0 1353 aaPredicted RBP6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 ABCC4O15439 1325 aa6.72□□□□□ -1.33
TGFBR1-208ENST00000550253 SCN9AQ15858 1988 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 SYNDIG1LA6NDD5 238 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 YDJCA8MPS7 323 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 ERVV-1B6SEH8 477 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 PPIP5K2O43314 1243 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 MLYCDO95822 493 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 SCGB1D1O95968 90 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 MYL6BP14649 208 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 EIF4A1P60842 406 aaKnown RBP6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 PROSER3Q2NL68 480 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 FAM102AQ5T9C2 384 aaPredicted RBP6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 CLEC9AQ6UXN8 241 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 RHOT2Q8IXI1 618 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 SLC15A3Q8IY34 581 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 ELOA2Q8IYF1 753 aaPredicted RBP6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 FAM71DQ8N9W8 422 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 KCNG4Q8TDN1 519 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 NSUN4Q96CB9 384 aaKnown RBP6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 CRAMP1Q96RY5 1269 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 ADARB2Q9NS39 739 aaKnown RBP6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 TBC1D14Q9P2M4 693 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 RIMKLBQ9ULI2 386 aa6.71□□□□□ -1.33
TGFBR1-208ENST00000550253 ZNF646O15015 1829 aaPredicted RBP6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 MROH6A6NGR9 719 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 CTIFO43310 598 aaKnown RBP6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 KCNA2P16389 499 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 CR2P20023 1033 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 ADORA2AP29274 412 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 PPP2R1AP30153 589 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 MAP2K2P36507 400 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 RPP30P78346 268 aaKnown RBP6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 CUL4AQ13619 759 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 CLCA4Q14CN2 919 aa6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 TAF7Q15545 349 aaPredicted RBP6.71□□□□□ -1.34
TGFBR1-208ENST00000550253 TBRG1Q3YBR2 411 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms