RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 DNM1Q05193 864 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 BST2Q10589 180 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 DPYDQ12882 1025 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 RTP5Q14D33 572 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 SHBQ15464 509 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 HNRNPA1L2Q32P51 320 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 SGO2Q562F6 1265 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FAM133BQ5BKY9 247 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FOXD4L5Q5VV16 416 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 LAYNQ6UX15 382 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 ADAT2Q7Z6V5 191 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 SAP25Q8TEE9 199 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 TSC1Q92574 1164 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 EDEM1Q92611 657 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 UBL7Q96S82 380 aaPredicted RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 NRSN2Q9GZP1 204 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 NEUROG2Q9H2A3 272 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 MMRN2Q9H8L6 949 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 ERVMER34-1Q9H9K5 563 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 EBF2Q9HAK2 575 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 HESX1Q9UBX0 185 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 TSPAN16Q9UKR8 245 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 FZD4Q9ULV1 537 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 TPX2Q9ULW0 747 aaKnown RBP10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 MAPK8IP1Q9UQF2 711 aa10.24□□□□□ -0.77
TRAFD1-207ENST00000550051 A0A1W2PR77 199 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 LRRC72A6NJI9 287 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 PLK4O00444 970 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ACSL4O60488 711 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 TBL1XO60907 577 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 SIN3BO75182 1162 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 WNT1P04628 370 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ITGAVP06756 1048 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 SETSIPP0DME0 302 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 VDRP11473 427 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 CD38P28907 300 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 SLC6A4P31645 630 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 HNF1BP35680 557 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ABCG1P45844 678 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 RXRGP48443 463 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 MXI1P50539 228 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 DAOAP59103 153 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ST8SIA6P61647 398 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 C19orf57Q0VDD7 668 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 KCNJ12Q14500 433 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 CST6Q15828 149 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 GOLGA7BQ2TAP0 167 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 C9orf64Q5T6V5 341 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 NUGGCQ68CJ6 796 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 LCLAT1Q6UWP7 414 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 OR2T34Q8NGX1 318 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 UBA3Q8TBC4 463 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 WFDC5Q8TCV5 224 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 IRGQQ8WZA9 623 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 MRGPRX3Q96LB0 322 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 DDX50Q9BQ39 737 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 PRORYQ9H606 182 aa10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 INTS6Q9UL03 887 aaKnown RBP10.23□□□□□ -0.77
TRAFD1-207ENST00000550051 ARID1BQ8NFD5 2236 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 GOLGA6L7A0A1B0GV03 622 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 FAM47DPA6NHR8 397 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 O00370 1275 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CETN3O15182 167 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 MSI1O43347 362 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 SRPRAP08240 638 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 ABCB4P21439 1286 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 SLC8A1P32418 973 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 SYKP43405 635 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 YWHAEP62258 255 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 IL9RQ01113 521 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 TARDBPQ13148 414 aaKnown RBP eCLIP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 ILKQ13418 452 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CUL2Q13617 745 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CNGA2Q16280 664 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CCDC157Q569K6 752 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 PRAMEF14Q5SWL7 426 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 RFWD3Q6PCD5 774 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 FBXL19Q6PCT2 694 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 NCEH1Q6PIU2 408 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 GATAD2AQ86YP4 633 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 SIX6OS1Q8N1H7 587 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 GANCQ8TET4 914 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 EEF2KMTQ96G04 330 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CRELD1Q96HD1 420 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 CNDP2Q96KP4 475 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 SLC6A18Q96N87 628 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 OMDQ99983 421 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 MTG2Q9H4K7 406 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 GDF3Q9NR23 364 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms