RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 IRGQQ8WZA9 623 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 GOLGA1Q92805 767 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 KAT5Q92993 513 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 TTC17Q96AE7 1141 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 MRGPRX3Q96LB0 322 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 ARMCX3Q9UH62 379 aaPredicted RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 INTS6Q9UL03 887 aaKnown RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 PCDHB4Q9Y5E5 795 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 SMG1Q96Q15 3661 aaKnown RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 TRABD2BA6NFA1 517 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 IRAK2O43187 625 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 SIN3BO75182 1162 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FYNP06241 537 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 PAEPP09466 180 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 CTSOP43234 321 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FKBP3Q00688 224 aaKnown RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 CYP4F3Q08477 520 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 CAMK2BQ13554 666 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FSCBQ5H9T9 825 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 PRAMEF14Q5SWL7 426 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 GALNT15Q8N3T1 639 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 CARNMT1Q8N4J0 409 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FIBINQ8TAL6 211 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 ERCC4Q92889 916 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FCRL2Q96LA5 508 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 SLC6A18Q96N87 628 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 IRX2Q9BZI1 471 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-205ENST00000550013 MIS12Q9H081 205 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 EBF2Q9HAK2 575 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 RMND1Q9NWS8 449 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 FBXL12Q9NXK8 326 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 NCKAP1Q9Y2A7 1128 aa15.99■□□□□ 0.15
RAB5C-205ENST00000550013 ASXL3Q9C0F0 2248 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 GCN1Q92616 2671 aaKnown RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 MID1O15344 667 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 WNT1P04628 370 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 FMO5P49326 533 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 GALCP54803 685 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 C21orf59P57076 290 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 ST8SIA6P61647 398 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 CST6Q15828 149 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 CNGA2Q16280 664 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 HNRNPA1L2Q32P51 320 aaKnown RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 COBLL1Q53SF7 1204 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 C9orf64Q5T6V5 341 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 NCEH1Q6PIU2 408 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 DHRS13Q6UX07 377 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 USP30Q70CQ3 517 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 CFAP52Q8N1V2 620 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 DQX1Q8TE96 717 aaKnown RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 AZIN2Q96A70 460 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 LRIG1Q96JA1 1093 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 NT5C1BQ96P26 610 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 ACE2Q9BYF1 805 aaPredicted RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 NUCKS1Q9H1E3 243 aaKnown RBP15.98■□□□□ 0.15
RAB5C-205ENST00000550013 NEUROG2Q9H2A3 272 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 DKK4Q9UBT3 224 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 FTSJ1Q9UET6 329 aa15.98■□□□□ 0.15
RAB5C-205ENST00000550013 COL5A1P20908 1838 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 A0A1B0GTQ1 180 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 A0A1W2PP55 124 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 A0A1W2PPC4 97 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 TTC34A8MYJ7 566 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 VILLO15195 856 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 PAPSS1O43252 624 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 MOCS2O96007 188 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 ASLP04424 464 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 RACK1P63244 317 aaKnown RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 SMAD1Q15797 465 aaKnown RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 PITRM1Q5JRX3 1037 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 MMAAQ8IVH4 418 aaKnown RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 PPM1KQ8N3J5 372 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 ZNF557Q8N988 423 aaPredicted RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 ADAM32Q8TC27 787 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 CCDC34Q96HJ3 373 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 HSFY1Q96LI6 401 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 GSDMAQ96QA5 445 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
RAB5C-205ENST00000550013 SCML1Q9UN30 329 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 ERVW-1Q9UQF0 538 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 NAALADL1Q9UQQ1 740 aa15.97■□□□□ 0.15
RAB5C-205ENST00000550013 CBX4O00257 560 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 WNT9AO14904 365 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 RNASEH1O60930 286 aaKnown RBP15.96■□□□□ 0.15
RAB5C-205ENST00000550013 FBXO21O94952 628 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 PSMD8P48556 350 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 NUMBP49757 651 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 CLDN6P56747 220 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 LRRC63Q05C16 580 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 CDH18Q13634 790 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 SHBQ15464 509 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 INAVAQ3KP66 663 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 DCAF6Q58WW2 860 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 MS4A13Q5J8X5 152 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 TAC4Q86UU9 113 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms