RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 RNF34Q969K3 372 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 NT5C3BQ969T7 300 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 MYO19Q96H55 970 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 BTN2A3PQ96KV6 586 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 SIK2Q9H0K1 926 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 TMEM245Q9H330 911 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC7-229ENST00000549883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC7-229ENST00000549883 VANGL2Q9ULK5 521 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 CYP8B1Q9UNU6 501 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 HS3ST4Q9Y661 456 aa10.12□□□□□ -0.79
HDAC7-229ENST00000549883 DOCK9Q9BZ29 2069 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ATXN2Q99700 1313 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 IGHV1OR15-9A0A0B4J2B8 117 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 BCLAF3A2AJT9 711 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 SMTNL1A8MU46 457 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 F5H5T6 163 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CNTN5O94779 1100 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 EPHX1P07099 455 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CCR1P32246 355 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CSKP41240 450 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 DHPSP49366 369 aaPredicted RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CXCR3P49682 368 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 COPAP53621 1224 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ZNF445P59923 1031 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ATP11AP98196 1134 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CSRP2Q16527 193 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CLEC16AQ2KHT3 1053 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 C15orf59Q2T9L4 293 aaPredicted RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ZSCAN23Q3MJ62 389 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 FNDC3BQ53EP0 1204 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 PITRM1Q5JRX3 1037 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 PLA2G2CQ5R387 149 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CXorf57Q6NSI4 855 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 SERPINA13PQ6UXR4 307 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 PRR23CQ6ZRP0 262 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 BNIPLQ7Z465 357 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ZNF683Q8IZ20 524 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 AHI1Q8N157 1196 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 CCAR2Q8N163 923 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 ATP6V0D2Q8N8Y2 350 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 UCMAQ8WVF2 138 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 MRGPRX3Q96LB0 322 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 DDX50Q9BQ39 737 aaKnown RBP10.11□□□□□ -0.79
HDAC7-229ENST00000549883 SYT11Q9BT88 431 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 TKTL2Q9H0I9 626 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 PRSS16Q9NQE7 514 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 TMEM74BQ9NUR3 256 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 TAS2R14Q9NYV8 317 aa10.11□□□□□ -0.79
HDAC7-229ENST00000549883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TTC34A8MYJ7 566 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 H0Y626 953 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 MAP3K13O43283 966 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TIMM44O43615 452 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 RHOBTB1O94844 696 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ZNF806P0C7X5 589 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 PDGFRAP16234 1089 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 POLR2EP19388 210 aaKnown RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ABCB4P21439 1286 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SCNN1AP37088 669 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ID4P47928 161 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 STK19P49842 368 aaPredicted RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SNX16P57768 344 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 DEUP1Q05D60 604 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 CAMK2GQ13555 558 aaPredicted RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 CDH18Q13634 790 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 NR1I3Q14994 352 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 EIF4HQ15056 248 aaKnown RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ELF2Q15723 593 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SLC25A52Q3SY17 297 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 CCDC14Q49A88 953 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ALFQ53S48 1182 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 MON1BQ7L1V2 547 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 FAM131BQ86XD5 332 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 WFIKKN2Q8TEU8 576 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 RXFP2Q8WXD0 754 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TTC17Q96AE7 1141 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ALG14Q96F25 216 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 LOXL4Q96JB6 756 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 RPL10LQ96L21 214 aaKnown RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 RPRD1AQ96P16 312 aaPredicted RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 TTYH3Q9C0H2 523 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 WDCPQ9H6R7 721 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 PRDM16Q9HAZ2 1276 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 FSCN3Q9NQT6 498 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SEPT11Q9NVA2 429 aaKnown RBP10.1□□□□□ -0.79
HDAC7-229ENST00000549883 ARHGEF38Q9NXL2 777 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 MPP6Q9NZW5 540 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
HDAC7-229ENST00000549883 C2CD4BA6NLJ0 364 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SYNCRIPO60506 623 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms