RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RPRD1AQ96P16 312 aaPredicted RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 PRMT1Q99873 361 aaKnown RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 DUSP15Q9H1R2 295 aaPredicted RBP16.31■□□□□ 0.2
DDX54-205ENST00000548786 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 CD248Q9HCU0 757 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 TMEM59LQ9UK28 342 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 CYP8B1Q9UNU6 501 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 SPAG17Q6Q759 2223 aa16.31■□□□□ 0.2
DDX54-205ENST00000548786 A0A1W2PQC6 194 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 SCNN1AP37088 669 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 P2RY2P41231 377 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 CSKP41240 450 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 UBASH3AP57075 661 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 C15orf59Q2T9L4 293 aaPredicted RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 RABGAP1LQ5R372 815 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 SH3PXD2AQ5TCZ1 1133 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 RNF43Q68DV7 783 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 IRF2BP2Q7Z5L9 587 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 CCAR2Q8N163 923 aaKnown RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX54-205ENST00000548786 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 FIBINQ8TAL6 211 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 RXFP2Q8WXD0 754 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 MTG2Q9H4K7 406 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 RRN3Q9NYV6 651 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 TAS2R14Q9NYV8 317 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 MBD1Q9UIS9 605 aaPredicted RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 INTS6Q9UL03 887 aaKnown RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 PLA2G4CQ9UP65 541 aa16.3■□□□□ 0.2
DDX54-205ENST00000548786 MUC22E2RYF6 1773 aaPredicted RBP16.3■□□□□ 0.2
DDX54-205ENST00000548786 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 TIMM44O43615 452 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 TNFAIP3P21580 790 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 CTSOP43234 321 aaPredicted RBP16.29■□□□□ 0.2
DDX54-205ENST00000548786 DHPSP49366 369 aaPredicted RBP16.29■□□□□ 0.2
DDX54-205ENST00000548786 CXCR3P49682 368 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 CREB5Q02930 508 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 PTPRNQ16849 979 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 MAP7D1Q3KQU3 841 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 PITRM1Q5JRX3 1037 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 MON1BQ7L1V2 547 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 KIAA0907Q7Z7F0 614 aaPredicted RBP16.29■□□□□ 0.2
DDX54-205ENST00000548786 TMEFF1Q8IYR6 380 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 ABCA7Q8IZY2 2146 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 APCDD1Q8J025 514 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 NT5C3BQ969T7 300 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 LMLNQ96KR4 655 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 MKRN2Q9H000 416 aaKnown RBP16.29■□□□□ 0.2
DDX54-205ENST00000548786 ARHGEF38Q9NXL2 777 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 IFNKQ9P0W0 207 aa16.29■□□□□ 0.2
DDX54-205ENST00000548786 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.29■□□□□ 0.2
DDX54-205ENST00000548786 RHOBTB1O94844 696 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 EPN2O95208 641 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 CALB1P05937 261 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 DLDP09622 509 aaKnown RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 SKILP12757 684 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 SDC4P31431 198 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 RDXP35241 583 aaKnown RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 BRMS1LQ5PSV4 323 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 DNAJC24Q6P3W2 148 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 ZC3H10Q96K80 434 aaKnown RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 HAUS4Q9H6D7 363 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 PRDM16Q9HAZ2 1276 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
DDX54-205ENST00000548786 KIAA1522Q9P206 1035 aaPredicted RBP16.28■□□□□ 0.2
DDX54-205ENST00000548786 THADAQ6YHU6 1953 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 ATXN2Q99700 1313 aaKnown RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 A0A1B0GVM2 712 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 TCAF2A6NFQ2 919 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 NPC1O15118 1278 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 SRGAP2O75044 1071 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 CNTN5O94779 1100 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 CAVIN2O95810 425 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 F9P00740 461 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 KRT3P12035 628 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 TGM1P22735 817 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 MPLP40238 635 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 STK19P49842 368 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 RPL6Q02878 288 aaKnown RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 ENPP2Q13822 863 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms