RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
BEST3-209ENST00000548658 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 RGL4Q8IZJ4 473 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 DEFB106AQ8N104 65 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 CARNMT1Q8N4J0 409 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
BEST3-209ENST00000548658 TTC17Q96AE7 1141 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 TOE1Q96GM8 510 aaKnown RBP11.79□□□□□ -0.52
BEST3-209ENST00000548658 HSPA12BQ96MM6 686 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 NUCKS1Q9H1E3 243 aaKnown RBP11.79□□□□□ -0.52
BEST3-209ENST00000548658 PCED1AQ9H1Q7 454 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 PLCB1Q9NQ66 1216 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 ANO10Q9NW15 660 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 STAP1Q9ULZ2 295 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 SCML1Q9UN30 329 aa11.79□□□□□ -0.52
BEST3-209ENST00000548658 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 MBD3O95983 291 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 F9P00740 461 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 SRPRAP08240 638 aaKnown RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 TACR2P21452 398 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 CD70P32970 193 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 CDH5P33151 784 aaPredicted RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 SCNN1AP37088 669 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 NNMTP40261 264 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 SGSHP51688 502 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 COPAP53621 1224 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 SULT2A1Q06520 285 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 TAF5Q15542 800 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 RAP1GAP2Q684P5 730 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 DPY19L2P1Q6NXN4 242 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 OLFML1Q6UWY5 402 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 FAM183BPQ6ZVS7 135 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 SND1Q7KZF4 910 aaKnown RBP eCLIP11.78□□□□□ -0.52
BEST3-209ENST00000548658 CHSY1Q86X52 802 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 ZNF677Q86XU0 584 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 LGI2Q8N0V4 545 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 DEFB119Q8N690 84 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 C18orf8Q96DM3 657 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 ERLEC1Q96DZ1 483 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 NAA15Q9BXJ9 866 aaKnown RBP11.78□□□□□ -0.52
BEST3-209ENST00000548658 SLC6A17Q9H1V8 727 aa11.78□□□□□ -0.52
BEST3-209ENST00000548658 PI4KAP42356 2102 aa11.77□□□□□ -0.52
BEST3-209ENST00000548658 A0A1B0GVM2 712 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 TCAF2A6NFQ2 919 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 METTL12A8MUP2 240 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 MEI4A8MW99 385 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 M0QYT0 321 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.53
BEST3-209ENST00000548658 DAB1O75553 588 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 KCNK5O95279 499 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 DNTTP04053 509 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 ERBB2P04626 1255 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CEACAM1P13688 526 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 HLA-EP13747 358 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 ENGP17813 658 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.53
BEST3-209ENST00000548658 CSKP41240 450 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 MATKP42679 507 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 GABRB2P47870 512 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 TTC31Q49AM3 519 aaPredicted RBP11.77□□□□□ -0.53
BEST3-209ENST00000548658 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 RNF219Q5W0B1 726 aaPredicted RBP11.77□□□□□ -0.53
BEST3-209ENST00000548658 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 ERICH1Q86X53 443 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 SLC41A1Q8IVJ1 513 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CFAP52Q8N1V2 620 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 WFDC5Q8TCV5 224 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 GPT2Q8TD30 523 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 DNASE2BQ8WZ79 361 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 LMLNQ96KR4 655 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 GPR174Q9BXC1 333 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 ZDHHC5Q9C0B5 715 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CAPN10Q9HC96 672 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 PRSS16Q9NQE7 514 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 TAB2Q9NYJ8 693 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.77□□□□□ -0.53
BEST3-209ENST00000548658 AJAP1Q9UKB5 411 aaPredicted RBP11.77□□□□□ -0.53
BEST3-209ENST00000548658 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CEP192Q8TEP8 1941 aa11.77□□□□□ -0.53
BEST3-209ENST00000548658 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 SYNJ2BP-COX16A0A087WUM0 186 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 A0A1B0GTW7 788 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 F8VZ95 297 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 GRAP2O75791 330 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 PLK1P53350 603 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 ECT2LQ008S8 904 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 NME3Q13232 169 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 KRT31Q15323 416 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 STX1AQ16623 288 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms