RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LUC7L3O95232 432 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 SEMA4FO95754 770 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 APOEP02649 317 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 ASLP04424 464 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 DCAF6Q58WW2 860 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 PITRM1Q5JRX3 1037 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 ZNF776Q68DI1 518 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 CFAP52Q8N1V2 620 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 KDF1Q8NAX2 398 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 SNX19Q92543 992 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 RSPH9Q9H1X1 276 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 POPDC2Q9HBU9 364 aa18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 FNDC3AQ9Y2H6 1198 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-205ENST00000548650 CABIN1Q9Y6J0 2220 aa18.02■□□□□ 0.47
CHMP1A-205ENST00000548650 PKD1L2Q7Z442 2459 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 FAM208BQ5VWN6 2430 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 CAPN9O14815 690 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 CER1O95813 267 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 TRUB2O95900 331 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 DNTTP04053 509 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 SLC9A1P19634 815 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 YWHAZP63104 245 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 EIF4EBP2Q13542 120 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 TAF5Q15542 800 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 CAMK4Q16566 473 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 HNRNPA1L2Q32P51 320 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 ZC3H12AQ5D1E8 599 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 RAP1GAP2Q684P5 730 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 CHSY1Q86X52 802 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 IRF2BP1Q8IU81 584 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 SHC3Q92529 594 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 BTBD1Q9H0C5 482 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 APEX2Q9UBZ4 518 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 SUN2Q9UH99 717 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 ZMIZ1Q9ULJ6 1067 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 WDFY3Q8IZQ1 3526 aa18.01■□□□□ 0.47
CHMP1A-205ENST00000548650 ZZEF1O43149 2961 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 ITIH6Q6UXX5 1313 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 SPEGQ15772 3267 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 A0A1B0GVT2 93 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 GTPBP10A4D1E9 387 aaKnown RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 TMEM8BA6NDV4 472 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 H0Y626 953 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 CBFA2T3O75081 653 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 SIN3BO75182 1162 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 TRIM16O95361 564 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 ZNF883P0CG24 379 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 TACR2P21452 398 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 MATKP42679 507 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 CTSOP43234 321 aaPredicted RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 AFF3P51826 1226 aaKnown RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 ST8SIA6P61647 398 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 UBE2HP62256 183 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 ARID5BQ14865 1188 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 TRIP6Q15654 476 aaKnown RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 ZNF423Q2M1K9 1284 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 GBP6Q6ZN66 633 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 RAB44Q7Z6P3 723 aaPredicted RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 LGI2Q8N0V4 545 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 KDM1BQ8NB78 822 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 BIRC7Q96CA5 298 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 BTN2A3PQ96KV6 586 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 FAM81BQ96LP2 452 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 CPXM1Q96SM3 734 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 ORAI3Q9BRQ5 295 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 PABPC3Q9H361 631 aaKnown RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 THAP9Q9H5L6 903 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 GAREM1Q9H706 876 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 OSGEPQ9NPF4 335 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 AJAP1Q9UKB5 411 aaPredicted RBP18■□□□□ 0.47
CHMP1A-205ENST00000548650 PCOLCE2Q9UKZ9 415 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 MSRB2Q9Y3D2 182 aa18■□□□□ 0.47
CHMP1A-205ENST00000548650 PTPRBP23467 1997 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 ARHGAP44Q17R89 818 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 HLA-BQ31612 363 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 IL27RAQ6UWB1 636 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 USP30Q70CQ3 517 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 PASD1Q8IV76 773 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 DHX40Q8IX18 779 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 WDTC1Q8N5D0 677 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 BAHD1Q8TBE0 780 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 SLC2A13Q96QE2 648 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 PRMT1Q99873 361 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 SGK2Q9HBY8 427 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 TM9SF3Q9HD45 589 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 SIX2Q9NPC8 291 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 SERGEFQ9UGK8 458 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 PCDHGC3Q9UN70 934 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 ERVW-1Q9UQF0 538 aa17.99■□□□□ 0.47
CHMP1A-205ENST00000548650 TTC34A8MYJ7 566 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 SRPRAP08240 638 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 FTH1P19P0C7X4 201 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 PON1P27169 355 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 USP8P40818 1118 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms