RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TRPV4Q9HBA0 871 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 USP15Q9Y4E8 981 aaPredicted RBP29.66■■■□□ 2.34
BRF1-213ENST00000548421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.65■■■□□ 2.34
BRF1-213ENST00000548421 CTAGE15A4D2H0 777 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 DRGXA6NNA5 263 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 APOC4-APOC2K7ER74 178 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 APOC2P02655 101 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 CTAGE8P0CG41 777 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 RABGAP1LQ5R372 815 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 NCBP2-AS2Q69YL0 99 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 CTAGE6Q86UF2 777 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 CTAGE4Q8IX94 777 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 TTC13Q8NBP0 860 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 IGSF8Q969P0 613 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 MYADMQ96S97 322 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 ETNK2Q9NVF9 386 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 NR2E1Q9Y466 385 aa29.65■■■□□ 2.34
BRF1-213ENST00000548421 KCNA5P22460 613 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 CHKAP35790 457 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 TMCO3Q6UWJ1 677 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 CPXM2Q8N436 756 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 KIAA1958Q8N8K9 716 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 MPP6Q9NZW5 540 aa29.64■■■□□ 2.34
BRF1-213ENST00000548421 ZFP37Q9Y6Q3 630 aaPredicted RBP29.64■■■□□ 2.34
BRF1-213ENST00000548421 CCDC188H7C350 402 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 RHOQP17081 205 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 GBP2P32456 591 aaPredicted RBP29.63■■■□□ 2.33
BRF1-213ENST00000548421 PRELID2Q8N945 189 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 HAUS1Q96CS2 278 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 MYEOVQ96EZ4 313 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 PRICKLE1Q96MT3 831 aaPredicted RBP29.63■■■□□ 2.33
BRF1-213ENST00000548421 HOMER3Q9NSC5 361 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 OBP2AQ9NY56 170 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 TBC1D14Q9P2M4 693 aa29.63■■■□□ 2.33
BRF1-213ENST00000548421 R3HDM2Q9Y2K5 976 aaKnown RBP29.63■■■□□ 2.33
BRF1-213ENST00000548421 WASH4PA8MWX3 477 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 VIPR2P41587 438 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 IRAK1P51617 712 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 PAFAH1B3Q15102 231 aaKnown RBP29.62■■■□□ 2.33
BRF1-213ENST00000548421 TTC39BQ5VTQ0 682 aaPredicted RBP29.62■■■□□ 2.33
BRF1-213ENST00000548421 RTL3Q8N8U3 475 aaKnown RBP29.62■■■□□ 2.33
BRF1-213ENST00000548421 PPM1EQ8WY54 764 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 P3H4Q92791 437 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 RBM12Q9NTZ6 932 aaKnown RBP29.62■■■□□ 2.33
BRF1-213ENST00000548421 DONSONQ9NYP3 566 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 MFHAS1Q9Y4C4 1052 aa29.62■■■□□ 2.33
BRF1-213ENST00000548421 TRDMT1O14717 391 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 PECAM1P16284 738 aaPredicted RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 SERPINB6P35237 376 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 NR2C2P49116 596 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 C2orf54Q08AI8 447 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 SMAD4Q13485 552 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 CYP1B1Q16678 543 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 ALFQ53S48 1182 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 C1orf228Q6PIY5 440 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 NLRP14Q86W24 1093 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 ACTL9Q8TC94 416 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 RSPRY1Q96DX4 576 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 FRMD8P1Q9BZ68 369 aaPredicted RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 RETREG1Q9H6L5 497 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 TMEM248Q9NWD8 314 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 SAE1Q9UBE0 346 aaPredicted RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 HEY1Q9Y5J3 304 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 TYW5A2RUC4 315 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 GFRA2O00451 464 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 RIOK3O14730 519 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 SLC9A3R1O14745 358 aaPredicted RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 CNTN5O94779 1100 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 LAMP2P13473 410 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 FCARP24071 287 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 VCPP55072 806 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 OTUD4Q01804 1114 aaKnown RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 NPNTQ6UXI9 565 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 CFAP52Q8N1V2 620 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 C12orf50Q8NA57 414 aaPredicted RBP29.61■■■□□ 2.33
BRF1-213ENST00000548421 C1orf54Q8WWF1 131 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 E2F7Q96AV8 911 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 OTUB2Q96DC9 234 aa29.61■■■□□ 2.33
BRF1-213ENST00000548421 KIF26AQ9ULI4 1882 aaPredicted RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 GRXCR2A6NFK2 248 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 MFSD11O43934 449 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 TSPAN3O60637 253 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 PHF2O75151 1096 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 SLU7O95391 586 aaKnown RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 RPS24P62847 133 aaKnown RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 GBE1Q04446 702 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 CCNG2Q16589 344 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 CIR1Q86X95 450 aaPredicted RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 TDRD5Q8NAT2 981 aaKnown RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 HJURPQ8NCD3 748 aaPredicted RBP29.6■■■□□ 2.33
BRF1-213ENST00000548421 BPIFB1Q8TDL5 484 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 ATG4AQ8WYN0 398 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 HLA-CQ95604 372 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 LRRC3BQ96PB8 259 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 ZFP14Q9HCL3 533 aa29.6■■■□□ 2.33
BRF1-213ENST00000548421 SGSHP51688 502 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 CDH4P55283 916 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 NOMO1Q15155 1222 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 BZW1Q7L1Q6 419 aaKnown RBP29.59■■■□□ 2.33
BRF1-213ENST00000548421 OTOP3Q7RTS5 596 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms