RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC11A2P49281 568 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RPS24P62847 133 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 SEMG2Q02383 582 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 BNIP3Q12983 259 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ZCWPW2Q504Y3 356 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 FSCBQ5H9T9 825 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 NADSYN1Q6IA69 706 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 PMF1Q6P1K2 205 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 TMEM270Q6UE05 265 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ADAM32Q8TC27 787 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 TFAP2BQ92481 460 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 MYO19Q96H55 970 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RPL10LQ96L21 214 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 PABPC3Q9H361 631 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 GDPD2Q9HCC8 539 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 CNGB3Q9NQW8 809 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 STOML2Q9UJZ1 356 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 PCDHB4Q9Y5E5 795 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 AK5Q9Y6K8 562 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 A0A1B0GTQ1 180 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 A0A1W2PPC4 97 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 A0A1W2PQ27 194 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 A0A1W2PQ64 194 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 O00370 1275 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 VILLO15195 856 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 SLC8A1P32418 973 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 PRCPP42785 496 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 PSMD8P48556 350 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ZNF445P59923 1031 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 RACK1P63244 317 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ENPEPQ07075 957 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 PNOCQ13519 176 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 CST6Q15828 149 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 EDRF1Q3B7T1 1238 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ANKRD40Q6AI12 368 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 APCDD1Q8J025 514 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 FIBINQ8TAL6 211 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 KCTD13Q8WZ19 329 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 FAXDC2Q96IV6 333 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 SLCO3A1Q9UIG8 710 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 ERVW-1Q9UQF0 538 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 NAALADL1Q9UQQ1 740 aa12.4□□□□□ -0.42
TRAFD1-205ENST00000548277 TBC1D3DA0A087WVF3 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3IA0A087WXS9 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3EA0A087X179 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3KA0A087X1G2 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3FA6NER0 549 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 LRRC72A6NJI9 287 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3LB9A6J9 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 M0QYV0 167 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 LATS1O95835 1130 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 LTFP02788 710 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SETSIPP0DME0 302 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 CD38P28907 300 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 ABCG1P45844 678 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 YWHAEP62258 255 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 KCNJ12Q14500 433 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SHBQ15464 509 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 PKDCCQ504Y2 493 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 LCLAT1Q6UWP7 414 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 CCDC117Q8IWD4 279 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 STK40Q8N2I9 435 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC35F5Q8WV83 523 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 KAT5Q92993 513 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SKA1Q96BD8 255 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 SERAC1Q96JX3 654 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 MRGPRX3Q96LB0 322 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 FAM129BQ96TA1 746 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms