RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 O00370 1275 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 ENC1O14682 589 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 CETN3O15182 167 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 RFPL3O75679 317 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 ABCB4P21439 1286 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 GALCP54803 685 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 CST6Q15828 149 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 FAM133BQ5BKY9 247 aaKnown RBP20.8■□□□□ 0.92
GATC-202ENST00000548171 C6orf118Q5T5N4 469 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 NCEH1Q6PIU2 408 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 UBA3Q8TBC4 463 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 LMLNQ96KR4 655 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 SLC6A18Q96N87 628 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 DCBLD2Q96PD2 775 aa20.8■□□□□ 0.92
GATC-202ENST00000548171 TARSL2A2RTX5 802 aaKnown RBP20.79■□□□□ 0.92
GATC-202ENST00000548171 ACSL4O60488 711 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 LDOC1O95751 146 aaPredicted RBP20.79■□□□□ 0.92
GATC-202ENST00000548171 LCP1P13796 627 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 JUPP14923 745 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 CD38P28907 300 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 SLC6A4P31645 630 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 CSKP41240 450 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 ARRB1P49407 418 aaPredicted RBP20.79■□□□□ 0.92
GATC-202ENST00000548171 CCR5P51681 352 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 PKP1Q13835 747 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 PKDCCQ504Y2 493 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 GATAD2AQ86YP4 633 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 CCDC117Q8IWD4 279 aaPredicted RBP20.79■□□□□ 0.92
GATC-202ENST00000548171 OR2T34Q8NGX1 318 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 SAP25Q8TEE9 199 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 CNDP2Q96KP4 475 aaKnown RBP20.79■□□□□ 0.92
GATC-202ENST00000548171 OMDQ99983 421 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 MTG2Q9H4K7 406 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 AASDHPPTQ9NRN7 309 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 SERGEFQ9UGK8 458 aa20.79■□□□□ 0.92
GATC-202ENST00000548171 ARID1BQ8NFD5 2236 aaPredicted RBP20.78■□□□□ 0.92
GATC-202ENST00000548171 GOLGA6L7A0A1B0GV03 622 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 TK2O00142 265 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 PLK4O00444 970 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 SIN3BO75182 1162 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 RNASEH2AO75792 299 aaKnown RBP20.78■□□□□ 0.92
GATC-202ENST00000548171 ITGAVP06756 1048 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 TBXAS1P24557 533 aaPredicted RBP20.78■□□□□ 0.92
GATC-202ENST00000548171 NDUFA8P51970 172 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 TBX4P57082 545 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 SLC45A4Q5BKX6 768 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 TCERG1LQ5VWI1 586 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 LCLAT1Q6UWP7 414 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 KRBA2Q6ZNG9 492 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 HSCBQ8IWL3 235 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
GATC-202ENST00000548171 EEF2KMTQ96G04 330 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 SPATA32Q96LK8 384 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 NEUROG2Q9H2A3 272 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 GDF3Q9NR23 364 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 STIM2Q9P246 746 aa20.78■□□□□ 0.92
GATC-202ENST00000548171 PTPRQQ9UMZ3 2332 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 A0A1W2PP55 124 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 C10orf142B7Z368 130 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 MID1O15344 667 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 WNT1P04628 370 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 SRPRAP08240 638 aaKnown RBP20.77■□□□□ 0.92
GATC-202ENST00000548171 PAEPP09466 180 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 CDH18Q13634 790 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 CBWD6Q4V339 395 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 DCAF17Q5H9S7 520 aaPredicted RBP20.77■□□□□ 0.92
GATC-202ENST00000548171 CBWD3Q5JTY5 395 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 CBWD5Q5RIA9 395 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 C9orf64Q5T6V5 341 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 MMAAQ8IVH4 418 aaKnown RBP20.77■□□□□ 0.92
GATC-202ENST00000548171 SLC35F5Q8WV83 523 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 CRELD1Q96HD1 420 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 MRGPRX3Q96LB0 322 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 NRSN2Q9GZP1 204 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 ERVW-1Q9UQF0 538 aa20.77■□□□□ 0.92
GATC-202ENST00000548171 EDDM13A0A1B0GTR0 161 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 SLC16A3O15427 465 aaKnown RBP20.76■□□□□ 0.91
GATC-202ENST00000548171 FBXO21O94952 628 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 MOCS3O95396 460 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 LTFP02788 710 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 EIF2S3P41091 472 aaKnown RBP20.76■□□□□ 0.91
GATC-202ENST00000548171 KRT85P78386 507 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 C19orf57Q0VDD7 668 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 KCNJ12Q14500 433 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 SHBQ15464 509 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 PITRM1Q5JRX3 1037 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 PRAMEF14Q5SWL7 426 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 NADSYN1Q6IA69 706 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 LRRC69Q6ZNQ3 347 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 SND1Q7KZF4 910 aaKnown RBP eCLIP20.76■□□□□ 0.91
GATC-202ENST00000548171 CARNMT1Q8N4J0 409 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 OXR1Q8N573 874 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 UBR7Q8N806 425 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 PIP4K2CQ8TBX8 421 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 CCDC34Q96HJ3 373 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 PRICKLE1Q96MT3 831 aaPredicted RBP20.76■□□□□ 0.91
GATC-202ENST00000548171 ERVMER34-1Q9H9K5 563 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 EBF2Q9HAK2 575 aa20.76■□□□□ 0.91
GATC-202ENST00000548171 INTS6Q9UL03 887 aaKnown RBP20.76■□□□□ 0.91
GATC-202ENST00000548171 ITIH6Q6UXX5 1313 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms