RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CDO1Q16878 200 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 SYPL2Q5VXT5 272 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 TRNP1Q6NT89 227 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 MSANTD2Q6P1R3 559 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-226ENST00000547259 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 DQX1Q8TE96 717 aaKnown RBP12.53□□□□□ -0.4
HDAC7-226ENST00000547259 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 CYP2S1Q96SQ9 504 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 EDEM2Q9BV94 578 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 TRIM7Q9C029 511 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
HDAC7-226ENST00000547259 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
HDAC7-226ENST00000547259 RRN3Q9NYV6 651 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 IP6K2Q9UHH9 426 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 LCMT1Q9UIC8 334 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 KIAA1549LQ6ZVL6 1849 aa12.53□□□□□ -0.4
HDAC7-226ENST00000547259 ASCC3Q8N3C0 2202 aaKnown RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 M0QYT0 321 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MYO1FO00160 1098 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MDM4O15151 490 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 COCHO43405 550 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MBL2P11226 248 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 PTPN9P43378 593 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ATP11AP98196 1134 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 OGDHQ02218 1023 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 CCDC6Q16204 474 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 C15orf59Q2T9L4 293 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SLC25A52Q3SY17 297 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SPDYCQ5MJ68 293 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MIB1Q86YT6 1006 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ZNF276Q8N554 614 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ADAM32Q8TC27 787 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 USP33Q8TEY7 942 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 FNIP1Q8TF40 1166 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SERPINB11Q96P15 392 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 TBCBQ99426 244 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 POLMQ9NP87 494 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-226ENST00000547259 TMEM9BQ9NQ34 198 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 SFMBT1Q9UHJ3 866 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 DNMT3LQ9UJW3 386 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MMP17Q9ULZ9 603 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 ZKSCAN5Q9Y2L8 839 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
HDAC7-226ENST00000547259 MYOFQ9NZM1 2061 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 SLC12A8A0AV02 714 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 GOLGA6L9A6NEM1 432 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 MSI1O43347 362 aaKnown RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 MOCS3O95396 460 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 OLFM2O95897 454 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 TBX18O95935 607 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 CEACAM1P13688 526 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 HADHBP55084 474 aaKnown RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PITX1P78337 314 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 SLC7A9P82251 487 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 LMAN2Q12907 356 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 NME3Q13232 169 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 MESDQ14696 234 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PSAPL1Q6NUJ1 521 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 CYP2U1Q7Z449 544 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 RASSF3Q86WH2 238 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 CCAR2Q8N163 923 aaKnown RBP12.51□□□□□ -0.41
HDAC7-226ENST00000547259 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 NPY6RQ99463 290 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 DDIT4Q9NX09 232 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 SALL4Q9UJQ4 1053 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 PAXBP1Q9Y5B6 917 aa12.51□□□□□ -0.41
HDAC7-226ENST00000547259 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 C4orf47A7E2U8 309 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 LEFTY2O00292 366 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 IRAK2O43187 625 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RNF8O76064 485 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 PROSCO94903 275 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms